Strain Fitness in Agrobacterium fabrum C58 around Atu1299

Experiment: Erythromycin 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 12.5 ug/mL
1,288,185	+				-0.5
1,288,381	-				-0.2
1,288,598	+				+0.6
1,288,790	+				+0.1
1,289,468	+		Atu1300	0.11	+0.3
1,289,533	+		Atu1300	0.17	+0.9
1,289,534	-		Atu1300	0.17	+0.7
1,289,559	+		Atu1300	0.19	-0.4
1,289,570	-		Atu1300	0.20	+2.4
1,289,586	+		Atu1300	0.22	+0.6
1,289,586	+		Atu1300	0.22	+2.4
1,289,604	+		Atu1300	0.23	+1.0
1,289,677	-		Atu1300	0.29	+1.8
1,289,677	-		Atu1300	0.29	+1.6
1,289,694	-		Atu1300	0.31	-0.5
1,289,697	+		Atu1300	0.31	+0.7
1,289,697	+		Atu1300	0.31	+1.6
1,289,755	+		Atu1300	0.36	+1.5
1,289,808	+		Atu1300	0.40	+1.1
1,289,832	+		Atu1300	0.42	+0.0
1,289,850	-		Atu1300	0.44	-1.0
1,289,935	+		Atu1300	0.51	+0.9
1,289,937	-		Atu1300	0.51	+1.4
1,290,141	+		Atu1300	0.69	+1.3
1,290,151	+		Atu1300	0.70	+0.7
1,290,151	+		Atu1300	0.70	+0.9
1,290,151	+		Atu1300	0.70	+0.9
1,290,159	-		Atu1300	0.70	+2.9
1,290,159	-		Atu1300	0.70	+1.4