Strain Fitness in Agrobacterium fabrum C58 around Atu1101

Experiment: Erythromycin 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 12.5 ug/mL
1,089,583	+				+0.3
1,089,631	+				+0.4
1,089,671	+		Atu1100	0.14	+0.5
1,089,742	+		Atu1100	0.22	+0.4
1,089,750	-		Atu1100	0.23	+0.3
1,089,817	+		Atu1100	0.30	+0.1
1,089,932	-		Atu1100	0.43	+0.4
1,090,015	-		Atu1100	0.53	+0.1
1,090,054	-		Atu1100	0.57	-0.5
1,090,238	+		Atu1100	0.78	+0.9
1,090,251	-		Atu1100	0.79	+2.2
1,090,256	-		Atu1100	0.80	+0.7
1,090,269	-		Atu1100	0.81	+0.0
1,091,178	-		Atu1102	0.12	-0.3
1,091,368	-		Atu1102	0.42	-0.1
1,091,421	-		Atu1102	0.51	+0.2
1,091,457	+		Atu1102	0.57	-0.1
1,091,481	+		Atu1102	0.60	+0.5
1,091,587	+		Atu1102	0.77	-0.4
1,091,742	+				+0.0
1,091,742	+				+0.2
1,091,814	-				+2.4
1,091,959	-		Atu1103	0.19	-2.3
1,091,988	+		Atu1103	0.23	+1.6