Strain Fitness in Agrobacterium fabrum C58 around Atu0084
Experiment: Erythromycin 12.5 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Erythromycin 12.5 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 87,339 | - | +0.1 | |||
| 87,365 | + | +2.5 | |||
| 87,382 | + | +2.7 | |||
| 87,437 | - | Atu0085 | 0.14 | +0.4 | |
| 87,442 | - | Atu0085 | 0.14 | +1.4 | |
| 87,452 | - | Atu0085 | 0.15 | +0.9 | |
| 87,465 | - | Atu0085 | 0.17 | +2.1 | |
| 87,609 | - | Atu0085 | 0.32 | +4.1 | |
| 87,751 | + | Atu0085 | 0.47 | +4.4 | |
| 87,832 | - | Atu0085 | 0.55 | +3.6 | |
| 87,862 | - | Atu0085 | 0.59 | +2.7 |
Or see this region's nucleotide sequence