Strain Fitness in Agrobacterium fabrum C58 around Atu4330

Experiment: Erythromycin 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 12.5 ug/mL
1,457,420	-				+1.3
1,457,495	+				+0.4
1,457,495	-				+0.2
1,457,505	-				+0.8
1,457,534	-				+0.5
1,457,673	-		Atu4329	0.24	+0.8
1,457,729	-		Atu4329	0.30	+1.3
1,457,789	+		Atu4329	0.37	+0.2
1,457,872	+		Atu4329	0.46	+0.1
1,457,931	+		Atu4329	0.53	+0.7
1,458,024	+		Atu4329	0.63	+0.4
1,458,156	+		Atu4329	0.78	-0.5
1,458,227	-		Atu4329	0.85	+0.3
1,458,374	+				+0.6
1,458,407	+				+0.3
1,458,516	-		Atu4330	0.18	+0.3
1,458,729	+		Atu4330	0.45	+0.2
1,458,807	-		Atu4330	0.54	-0.1
1,458,820	+		Atu4330	0.56	+0.7
1,458,866	+		Atu4330	0.62	-0.5
1,458,960	+		Atu4330	0.73	+0.7
1,458,981	-		Atu4330	0.76	+0.2
1,459,038	+		Atu4330	0.83	+0.9
1,459,046	-		Atu4330	0.84	+0.0
1,459,048	-		Atu4330	0.84	+1.4
1,459,056	-		Atu4330	0.85	+0.4
1,459,066	-		Atu4330	0.86	+0.9
1,459,066	-		Atu4330	0.86	+0.6
1,459,231	+				+0.8
1,459,234	-				+0.1
1,459,240	+				-1.5
1,459,336	-				-0.4
1,459,354	-				+1.3
1,459,380	+				+0.6
1,459,428	+		Atu4331	0.12	-1.2
1,459,428	+		Atu4331	0.12	+0.1
1,459,428	+		Atu4331	0.12	-0.2
1,459,433	+		Atu4331	0.12	+0.0
1,459,436	-		Atu4331	0.13	+0.1
1,459,638	-		Atu4331	0.27	+0.7
1,459,653	-		Atu4331	0.28	-0.1
1,459,682	-		Atu4331	0.30	-0.8
1,459,687	+		Atu4331	0.30	+0.1
1,459,715	+		Atu4331	0.32	-1.0
1,459,848	-		Atu4331	0.42	-0.2
1,459,902	-		Atu4331	0.45	-0.2
1,459,925	+		Atu4331	0.47	+0.1
1,459,993	-		Atu4331	0.52	-0.0
1,460,027	-		Atu4331	0.54	+0.5
1,460,089	-		Atu4331	0.59	-0.1