Strain Fitness in Agrobacterium fabrum C58 around Atu4249

Experiment: Erythromycin 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 12.5 ug/mL
1,372,292	+		Atu4247	0.69	-0.7
1,372,309	+		Atu4247	0.70	+0.0
1,372,336	+		Atu4247	0.72	-0.2
1,372,336	+		Atu4247	0.72	+1.2
1,372,344	-		Atu4247	0.72	+0.0
1,372,371	+		Atu4247	0.74	-0.3
1,372,379	-		Atu4247	0.75	+0.3
1,372,414	-		Atu4247	0.77	-0.3
1,372,495	-		Atu4247	0.83	+0.1
1,372,510	+		Atu4247	0.84	-0.3
1,372,510	+		Atu4247	0.84	+1.3
1,372,667	+				+0.2
1,372,691	-				-0.1
1,372,694	-				+0.8
1,372,766	-				-0.4
1,373,040	-				-0.2
1,373,205	+				-0.8
1,373,205	+				-0.9
1,373,216	+				+0.3
1,373,267	-				-0.2
1,373,340	+				+0.8
1,373,356	+				+0.0
1,373,477	+		Atu4249	0.18	-0.0
1,373,485	-		Atu4249	0.19	+1.1
1,373,530	+		Atu4249	0.23	-1.4
1,373,553	+		Atu4249	0.26	+0.5
1,373,647	+		Atu4249	0.35	-0.5
1,373,686	-		Atu4249	0.38	+0.3
1,373,733	+		Atu4249	0.43	+0.7
1,373,740	+		Atu4249	0.43	+0.9
1,373,829	-		Atu4249	0.52	-0.4
1,373,849	+		Atu4249	0.54	+1.0
1,373,912	+		Atu4249	0.60	+0.0
1,373,980	+		Atu4249	0.66	-0.2
1,373,980	+		Atu4249	0.66	-0.6
1,374,034	-		Atu4249	0.72	+0.6
1,374,059	-		Atu4249	0.74	-0.0
1,374,118	-		Atu4249	0.80	-0.8
1,374,213	+		Atu4249	0.89	+0.6
1,374,269	+				+0.1
1,374,280	-				+1.3
1,374,362	+				-0.7
1,374,368	-				-0.2
1,374,444	+		Atu4250	0.12	-1.7
1,374,460	-		Atu4250	0.14	+0.5
1,374,554	-		Atu4250	0.25	-0.1
1,374,611	+		Atu4250	0.32	-0.4
1,374,624	+		Atu4250	0.33	-0.1
1,374,624	+		Atu4250	0.33	-0.2
1,374,633	+		Atu4250	0.34	+0.9
1,374,641	-		Atu4250	0.35	-0.1
1,374,776	+		Atu4250	0.51	-0.0
1,374,806	-		Atu4250	0.55	+0.8
1,374,807	+		Atu4250	0.55	-0.7
1,374,986	+		Atu4250	0.76	-0.5
1,375,001	-		Atu4250	0.78	-0.1
1,375,011	-		Atu4250	0.79	-1.1
1,375,021	+		Atu4250	0.80	-0.1
1,375,138	+				-0.4
1,375,270	-		Atu4251	0.10	-0.2
1,375,277	-		Atu4251	0.11	-0.8