Experiment: Erythromycin 12.5 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3266 and Atu3267 are separated by 1 nucleotides Atu3267 and Atu3268 overlap by 1 nucleotides
Atu3266: Atu3266 - dihydroorotase, at 284,917 to 286,140
Atu3266
Atu3267: Atu3267 - dipeptide ABC transporter permease, at 286,142 to 287,017
Atu3267
Atu3268: Atu3268 - dipeptide ABC transporter permease, at 287,017 to 287,925
Atu3268
Position (kb) 286
287
288 Strain fitness (log2 ratio) -2
-1
0
1 at 285.329 kb on - strand, within Atu3266 at 285.334 kb on + strand, within Atu3266 at 285.335 kb on - strand, within Atu3266 at 285.381 kb on - strand, within Atu3266 at 285.457 kb on + strand, within Atu3266 at 285.465 kb on - strand, within Atu3266 at 285.476 kb on - strand, within Atu3266 at 285.532 kb on + strand, within Atu3266 at 285.613 kb on + strand, within Atu3266 at 285.621 kb on + strand, within Atu3266 at 285.702 kb on + strand, within Atu3266 at 285.710 kb on - strand, within Atu3266 at 285.763 kb on - strand, within Atu3266 at 285.923 kb on - strand, within Atu3266 at 285.993 kb on - strand, within Atu3266 at 286.095 kb on - strand at 286.123 kb on - strand at 286.138 kb on - strand at 286.149 kb on + strand at 286.159 kb on + strand at 286.159 kb on + strand at 286.161 kb on + strand at 286.167 kb on - strand at 286.167 kb on - strand at 286.167 kb on - strand at 286.167 kb on - strand at 286.178 kb on - strand at 286.328 kb on - strand, within Atu3267 at 286.417 kb on + strand, within Atu3267 at 286.436 kb on + strand, within Atu3267 at 286.498 kb on + strand, within Atu3267 at 286.780 kb on - strand, within Atu3267 at 286.900 kb on + strand, within Atu3267 at 286.964 kb on + strand at 287.028 kb on + strand at 287.142 kb on - strand, within Atu3268 at 287.385 kb on + strand, within Atu3268 at 287.508 kb on + strand, within Atu3268 at 287.680 kb on + strand, within Atu3268 at 287.688 kb on + strand, within Atu3268 at 287.688 kb on - strand, within Atu3268 at 287.688 kb on - strand, within Atu3268 at 287.696 kb on - strand, within Atu3268 at 287.753 kb on + strand, within Atu3268 at 287.772 kb on + strand, within Atu3268 at 287.792 kb on - strand, within Atu3268 at 287.797 kb on - strand, within Atu3268 at 287.880 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Erythromycin 12.5 ug/mL remove 285,329 - Atu3266 0.34 +0.1 285,334 + Atu3266 0.34 -0.8 285,335 - Atu3266 0.34 +1.5 285,381 - Atu3266 0.38 +0.2 285,457 + Atu3266 0.44 -0.1 285,465 - Atu3266 0.45 +0.4 285,476 - Atu3266 0.46 +0.7 285,532 + Atu3266 0.50 +1.5 285,613 + Atu3266 0.57 -2.2 285,621 + Atu3266 0.58 -1.1 285,702 + Atu3266 0.64 +0.5 285,710 - Atu3266 0.65 +0.6 285,763 - Atu3266 0.69 -0.6 285,923 - Atu3266 0.82 +0.1 285,993 - Atu3266 0.88 -0.2 286,095 - -0.8 286,123 - -0.1 286,138 - -0.0 286,149 + -0.3 286,159 + -0.8 286,159 + +1.4 286,161 + +0.2 286,167 - +0.1 286,167 - -0.4 286,167 - -0.0 286,167 - -0.4 286,178 - +0.6 286,328 - Atu3267 0.21 -0.1 286,417 + Atu3267 0.31 -0.4 286,436 + Atu3267 0.34 -2.4 286,498 + Atu3267 0.41 +0.2 286,780 - Atu3267 0.73 -0.8 286,900 + Atu3267 0.87 -1.2 286,964 + +0.2 287,028 + +1.2 287,142 - Atu3268 0.14 +0.8 287,385 + Atu3268 0.40 -0.3 287,508 + Atu3268 0.54 +0.3 287,680 + Atu3268 0.73 -0.9 287,688 + Atu3268 0.74 -0.9 287,688 - Atu3268 0.74 -0.1 287,688 - Atu3268 0.74 +0.2 287,696 - Atu3268 0.75 +0.5 287,753 + Atu3268 0.81 -0.2 287,772 + Atu3268 0.83 +1.2 287,792 - Atu3268 0.85 -0.6 287,797 - Atu3268 0.86 +0.1 287,880 + -0.0
Or see this region's nucleotide sequence