Strain Fitness in Agrobacterium fabrum C58 around Atu2390

Experiment: Erythromycin 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 12.5 ug/mL
2,359,361	+				+2.5
2,359,383	-				+0.2
2,359,398	+				+0.3
2,359,398	+				+0.2
2,359,398	+				-0.2
2,359,406	-				+0.9
2,359,428	-				-0.6
2,359,428	-				+1.6
2,359,428	-				-0.5
2,359,428	-				+0.2
2,359,458	-				+0.9
2,359,498	-				-0.8
2,359,507	-				+0.4
2,359,542	-				-0.6
2,359,602	+		Atu2389	0.15	-1.8
2,359,654	+		Atu2389	0.21	-0.2
2,359,711	+		Atu2389	0.27	+0.2
2,359,718	+		Atu2389	0.28	-0.1
2,359,792	+		Atu2389	0.36	-0.7
2,359,868	-		Atu2389	0.45	-2.4
2,359,879	+		Atu2389	0.46	+0.5
2,359,934	+		Atu2389	0.53	-0.8
2,359,959	+		Atu2389	0.55	-0.8
2,360,051	+		Atu2389	0.66	+0.8
2,360,051	+		Atu2389	0.66	+1.2
2,360,058	+		Atu2389	0.67	-0.2
2,360,106	+		Atu2389	0.72	+0.1
2,360,239	+		Atu2389	0.87	+0.1
2,360,247	-		Atu2389	0.88	-0.1
2,360,252	-		Atu2389	0.89	-0.1
2,360,254	+		Atu2389	0.89	-1.1
2,360,330	-				+0.7
2,360,394	+				+1.1
2,360,466	+		Atu2390	0.14	+0.2
2,360,472	-		Atu2390	0.14	-0.9
2,360,644	+		Atu2390	0.34	+0.5
2,360,644	+		Atu2390	0.34	+0.1
2,360,649	+		Atu2390	0.35	-0.1
2,360,657	-		Atu2390	0.36	-0.8
2,360,657	-		Atu2390	0.36	-1.0
2,360,657	-		Atu2390	0.36	+0.5
2,360,764	-		Atu2390	0.48	+0.3
2,360,769	-		Atu2390	0.48	-0.1
2,360,779	-		Atu2390	0.50	+1.6
2,360,849	+		Atu2390	0.58	+0.2
2,360,849	+		Atu2390	0.58	-0.3
2,360,857	-		Atu2390	0.59	-0.5
2,360,857	-		Atu2390	0.59	-0.0
2,360,859	+		Atu2390	0.59	+0.8
2,360,859	+		Atu2390	0.59	+0.2
2,360,859	+		Atu2390	0.59	-0.4
2,360,867	-		Atu2390	0.60	+0.2
2,360,867	-		Atu2390	0.60	-0.7
2,360,891	-		Atu2390	0.62	+0.8
2,360,925	+		Atu2390	0.66	-1.1
2,360,992	+		Atu2390	0.74	-0.5
2,361,000	-		Atu2390	0.75	-0.5
2,361,159	-				+2.2
2,361,163	-				-0.1
2,361,259	+				-1.4
2,361,264	-				+0.1
2,361,290	-				-1.8
2,361,290	-				-0.0
2,361,341	-		Atu2391	0.10	-1.0
2,361,461	-		Atu2391	0.22	-0.4
2,361,476	-		Atu2391	0.24	-0.3
2,361,477	-		Atu2391	0.24	-1.4
2,361,488	-		Atu2391	0.25	-0.6
2,361,533	+		Atu2391	0.30	-0.1
2,361,621	+		Atu2391	0.38	-2.1
2,361,715	+		Atu2391	0.48	-0.3
2,361,715	+		Atu2391	0.48	+1.8
2,361,723	-		Atu2391	0.49	-0.2
2,361,890	+		Atu2391	0.65	+2.0
2,361,936	+		Atu2391	0.70	-0.7
2,361,968	+		Atu2391	0.73	-1.0
2,361,968	+		Atu2391	0.73	+0.2
2,361,977	-		Atu2391	0.74	+1.2
2,362,085	+		Atu2391	0.85	-0.1
2,362,146	-				-0.4