Strain Fitness in Agrobacterium fabrum C58 around Atu2371

Experiment: Erythromycin 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 12.5 ug/mL
2,343,464	+				+0.3
2,343,464	+				+1.1
2,343,472	-				+1.1
2,343,557	+		Atu2370	0.18	+0.8
2,343,649	+		Atu2370	0.26	+0.4
2,343,675	+		Atu2370	0.29	+1.0
2,343,786	+		Atu2370	0.39	+1.2
2,343,805	-		Atu2370	0.41	+0.8
2,343,855	+		Atu2370	0.45	+0.3
2,343,926	+		Atu2370	0.52	+0.5
2,343,960	+		Atu2370	0.55	+0.4
2,344,065	-		Atu2370	0.64	+0.8
2,344,094	+		Atu2370	0.67	+0.7
2,344,101	+		Atu2370	0.68	+0.5
2,344,213	+		Atu2370	0.78	+0.5
2,344,274	-		Atu2370	0.84	-0.1
2,344,281	+		Atu2370	0.84	+1.0
2,344,286	+		Atu2370	0.85	+0.7
2,344,289	-		Atu2370	0.85	+0.7
2,344,289	-		Atu2370	0.85	+0.2
2,344,294	-		Atu2370	0.86	+0.1
2,344,309	+		Atu2370	0.87	-0.8
2,344,329	-		Atu2370	0.89	+2.0
2,344,332	+		Atu2370	0.89	+0.7
2,344,332	+		Atu2370	0.89	+1.2
2,344,332	+		Atu2370	0.89	+1.2
2,344,340	-		Atu2370	0.90	+1.0
2,344,340	-		Atu2370	0.90	+1.0
2,344,366	-				+0.2
2,344,366	-				+1.2
2,344,446	+				+0.5
2,344,446	+				+0.8
2,344,573	+		Atu2371	0.12	+0.9
2,344,576	-		Atu2371	0.12	-0.3
2,344,588	+		Atu2371	0.13	+0.6
2,344,693	-		Atu2371	0.23	+0.2
2,344,696	+		Atu2371	0.23	+0.7
2,344,854	+		Atu2371	0.38	+0.2
2,344,854	+		Atu2371	0.38	+2.2
2,344,873	-		Atu2371	0.40	+0.5
2,344,930	+		Atu2371	0.45	+0.7
2,344,936	+		Atu2371	0.46	+1.0
2,344,944	-		Atu2371	0.47	-0.3
2,344,994	+		Atu2371	0.51	+0.0
2,345,416	-				+0.2
2,345,420	+				+0.5
2,345,428	-				+0.4
2,345,428	-				+0.6
2,345,428	-				-0.4
2,345,464	-				-0.1
2,345,474	-				+0.4
2,345,507	+				+0.5
2,345,638	-				+0.0
2,345,671	+				+1.6
2,345,671	+				-1.6
2,345,765	+				+1.1
2,345,812	-		Atu2372	0.13	+0.3
2,345,812	-		Atu2372	0.13	+0.1
2,345,850	-		Atu2372	0.17	+0.6
2,346,054	-		Atu2372	0.38	+0.4
2,346,214	-		Atu2372	0.55	+0.5
2,346,261	+		Atu2372	0.60	+0.5
2,346,330	-		Atu2372	0.68	+0.9
2,346,352	+		Atu2372	0.70	+0.5
2,346,360	-		Atu2372	0.71	+2.2
2,346,373	+		Atu2372	0.72	+0.6
2,346,470	+		Atu2372	0.82	+1.2
2,346,505	-		Atu2372	0.86	+0.9