Strain Fitness in Agrobacterium fabrum C58 around Atu1696

Experiment: Erythromycin 12.5 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 12.5 ug/mL
1,680,421	-		Atu1695	0.25	-0.3
1,680,451	+		Atu1695	0.28	+0.7
1,680,453	+		Atu1695	0.28	-0.7
1,680,472	+		Atu1695	0.30	+0.6
1,680,480	-		Atu1695	0.30	-0.2
1,680,637	-		Atu1695	0.45	+1.0
1,680,643	+		Atu1695	0.46	+0.1
1,680,659	-		Atu1695	0.48	-0.0
1,680,728	+		Atu1695	0.54	+0.3
1,680,754	-		Atu1695	0.57	+0.4
1,680,761	+		Atu1695	0.57	+0.4
1,681,018	+		Atu1695	0.82	-0.4
1,681,063	+		Atu1695	0.86	+0.0
1,681,229	-				-0.1
1,681,352	-				+0.3
1,681,352	-				-1.1
1,681,475	+		Atu1696	0.10	-0.8
1,681,490	+		Atu1696	0.12	-0.7
1,681,524	-		Atu1696	0.15	-0.6
1,681,565	+		Atu1696	0.19	-1.9
1,681,566	+		Atu1696	0.20	-0.7
1,681,593	+		Atu1696	0.22	-1.1
1,681,804	+		Atu1696	0.44	-2.3
1,682,111	-		Atu1696	0.76	+0.9
1,682,112	+		Atu1696	0.76	-0.8
1,682,117	+		Atu1696	0.76	-1.2
1,682,234	+		Atu1696	0.88	-0.2
1,682,333	+				+0.1
1,682,377	+				+0.2
1,682,429	+				+0.4
1,682,625	+		Atu1697	0.23	+0.1
1,682,647	-		Atu1697	0.25	-0.7
1,682,697	-		Atu1697	0.29	+0.2
1,682,747	-		Atu1697	0.33	+2.3
1,682,809	-		Atu1697	0.39	-0.3
1,682,844	+		Atu1697	0.41	+0.3
1,682,844	+		Atu1697	0.41	+0.3
1,682,892	+		Atu1697	0.45	+0.8
1,682,892	+		Atu1697	0.45	-0.3
1,682,949	+		Atu1697	0.50	-0.1
1,682,958	-		Atu1697	0.51	+0.3
1,682,968	-		Atu1697	0.52	+0.3
1,682,985	+		Atu1697	0.53	-1.2
1,683,001	-		Atu1697	0.55	+0.2
1,683,001	-		Atu1697	0.55	-1.9
1,683,003	+		Atu1697	0.55	+0.1
1,683,007	-		Atu1697	0.55	-1.1
1,683,210	-		Atu1697	0.72	-1.4