Strain Fitness in Agrobacterium fabrum C58 around Atu4092

Experiment: Erythromycin 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 6.25 ug/mL
1,212,175	-		Atu4091	0.43	-0.0
1,212,179	-		Atu4091	0.44	+0.0
1,212,302	-		Atu4091	0.51	+0.9
1,212,374	+		Atu4091	0.56	-1.1
1,212,439	-		Atu4091	0.60	-0.1
1,212,454	+		Atu4091	0.61	-0.6
1,212,456	+		Atu4091	0.61	+0.7
1,212,470	-		Atu4091	0.62	-0.9
1,212,482	-		Atu4091	0.63	-0.4
1,212,607	+		Atu4091	0.71	+0.1
1,212,657	+		Atu4091	0.74	-0.4
1,212,670	-		Atu4091	0.75	-0.4
1,212,769	+		Atu4091	0.81	+0.1
1,212,808	-		Atu4091	0.84	-0.4
1,212,872	+		Atu4091	0.88	-0.1
1,212,915	+				-0.4
1,212,962	-				-0.3
1,213,008	+				+0.3
1,213,008	+				-0.2
1,213,082	+				+0.2
1,213,133	-				+0.1
1,213,196	+		Atu4092	0.11	-0.9
1,213,199	-		Atu4092	0.11	-1.1
1,213,276	+		Atu4092	0.17	-0.9
1,213,276	+		Atu4092	0.17	-0.4
1,213,276	+		Atu4092	0.17	+0.1
1,213,445	+		Atu4092	0.32	+0.7
1,213,487	-		Atu4092	0.36	+0.2
1,213,581	+		Atu4092	0.44	-0.2
1,213,589	-		Atu4092	0.44	-0.6
1,213,591	+		Atu4092	0.45	-0.3
1,213,597	-		Atu4092	0.45	-1.1
1,213,651	+		Atu4092	0.50	-1.3
1,213,658	+		Atu4092	0.50	-0.0
1,213,671	+		Atu4092	0.52	-2.5
1,213,757	-		Atu4092	0.59	+1.8
1,213,831	-		Atu4092	0.65	+0.1
1,213,967	+		Atu4092	0.77	-0.4
1,214,058	-		Atu4092	0.85	-0.2
1,214,149	-				+0.3
1,214,155	+				+0.3
1,214,163	-				-0.8
1,214,183	-				-0.6
1,214,324	+		Atu8036	0.43	+0.0
1,214,338	+		Atu8036	0.54	+0.6
1,214,338	+		Atu8036	0.54	+0.0
1,214,338	+		Atu8036	0.54	-0.4
1,214,596	+		Atu4093	0.67	+0.3
1,214,596	+		Atu4093	0.67	-0.0
1,214,604	-		Atu4093	0.71	+0.4
1,214,604	-		Atu4093	0.71	+0.1
1,214,683	+				+0.9
1,214,836	-		Atu4094	0.37	+0.2
1,214,864	+		Atu4094	0.44	-0.5
1,214,934	-		Atu4094	0.60	-0.1
1,214,991	+		Atu4094	0.74	+0.5
1,215,058	-				+1.0
1,215,074	+				-0.5
1,215,116	-				-0.7
1,215,180	-		Atu4095	0.27	+1.1