Strain Fitness in Agrobacterium fabrum C58 around Atu4436

Experiment: Erythromycin 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 6.25 ug/mL
1,578,219	-		Atu4434	0.87	+0.1
1,578,219	-		Atu4434	0.87	-0.0
1,578,237	-		Atu4434	0.89	+0.2
1,578,245	+				+1.6
1,578,253	-				+0.2
1,578,321	+				-0.5
1,578,416	-		Atu4435	0.13	-0.3
1,578,500	+		Atu4435	0.24	-0.4
1,578,593	+		Atu4435	0.36	+0.5
1,578,601	-		Atu4435	0.37	+1.0
1,578,695	-		Atu4435	0.50	-1.1
1,579,029	-				-1.1
1,579,113	+				+0.0
1,579,271	-				-0.7
1,579,350	+		Atu4436	0.17	+0.8
1,579,473	-		Atu4436	0.29	-0.3
1,579,493	+		Atu4436	0.31	+1.3
1,579,538	-		Atu4436	0.35	-0.3
1,579,586	+		Atu4436	0.40	-0.1
1,579,599	-		Atu4436	0.41	-0.7
1,579,701	-		Atu4436	0.51	-0.3
1,579,703	+		Atu4436	0.51	-0.4
1,579,711	-		Atu4436	0.52	-0.3
1,579,711	-		Atu4436	0.52	-0.9
1,579,752	-		Atu4436	0.56	-2.4
1,579,767	-		Atu4436	0.57	-0.3
1,579,796	+		Atu4436	0.60	+3.3
1,579,804	-		Atu4436	0.61	-0.8
1,579,809	-		Atu4436	0.61	-1.0
1,579,870	-		Atu4436	0.67	-0.3
1,579,889	-		Atu4436	0.69	-0.5
1,579,946	+		Atu4436	0.75	-1.4
1,580,092	-		Atu4436	0.89	-0.3
1,580,102	+		Atu4436	0.90	+0.5
1,580,186	+				-0.5
1,580,254	-				-0.5
1,580,361	+				+1.7
1,580,361	+				+0.2
1,580,371	+				+0.1
1,580,381	-				-0.1
1,580,475	+				-0.6
1,580,509	+				-0.1
1,580,509	+				+0.3
1,580,548	+				+0.3
1,580,559	+				-0.1
1,580,672	+		Atu4437	0.13	-0.2
1,580,750	-		Atu4437	0.21	-0.9
1,580,795	-		Atu4437	0.26	+0.6
1,580,939	-		Atu4437	0.42	+0.4
1,581,167	-		Atu4437	0.67	+0.0