Strain Fitness in Agrobacterium fabrum C58 around Atu4355

Experiment: Erythromycin 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 6.25 ug/mL
1,489,864	+		Atu4354	0.46	-0.7
1,489,879	-		Atu4354	0.46	-0.7
1,489,887	-		Atu4354	0.47	+1.0
1,489,913	-		Atu4354	0.48	+0.7
1,489,923	+		Atu4354	0.49	-0.8
1,489,926	-		Atu4354	0.49	+1.0
1,489,931	-		Atu4354	0.50	+0.0
1,490,046	-		Atu4354	0.56	+0.0
1,490,129	-		Atu4354	0.61	+0.0
1,490,146	-		Atu4354	0.62	-0.3
1,490,246	-		Atu4354	0.68	+1.3
1,490,247	+		Atu4354	0.68	-0.1
1,490,286	+		Atu4354	0.71	+1.3
1,490,417	+		Atu4354	0.79	+0.1
1,490,522	-		Atu4354	0.85	-0.2
1,490,539	-		Atu4354	0.86	+0.4
1,490,968	-		Atu4355	0.12	+0.0
1,491,015	-		Atu4355	0.15	+0.4
1,491,043	-		Atu4355	0.17	+1.0
1,491,095	-		Atu4355	0.20	-0.1
1,491,108	+		Atu4355	0.21	-0.1
1,491,115	-		Atu4355	0.22	+0.3
1,491,164	-		Atu4355	0.25	+0.4
1,491,208	-		Atu4355	0.28	-0.2
1,491,392	-		Atu4355	0.39	-0.1
1,491,446	+		Atu4355	0.43	-0.1
1,491,446	+		Atu4355	0.43	+0.7
1,491,446	+		Atu4355	0.43	+0.0
1,491,494	+		Atu4355	0.46	+1.0
1,491,521	-		Atu4355	0.48	+0.3
1,491,521	-		Atu4355	0.48	+0.1
1,491,736	+		Atu4355	0.62	+0.4
1,491,744	-		Atu4355	0.62	-0.0
1,491,838	-		Atu4355	0.68	-0.2
1,491,841	+		Atu4355	0.68	+0.0
1,491,867	+		Atu4355	0.70	-0.2
1,491,946	-		Atu4355	0.75	+0.3
1,491,975	+		Atu4355	0.77	+1.0
1,491,975	+		Atu4355	0.77	+0.1
1,491,983	-		Atu4355	0.77	+0.1
1,491,983	-		Atu4355	0.77	+0.7
1,492,002	+		Atu4355	0.79	-0.6
1,492,025	+		Atu4355	0.80	+0.3
1,492,029	-		Atu4355	0.80	+0.9
1,492,208	-				-1.8
1,492,373	+				+0.1
1,492,381	-				+1.6
1,492,487	-				-0.2
1,492,672	+				-0.9
1,492,749	+				+0.0
1,492,861	+		Atu4356	0.15	-0.0
1,492,897	+		Atu4356	0.18	+0.2
1,492,897	+		Atu4356	0.18	+0.1
1,492,905	-		Atu4356	0.19	+0.3
1,492,998	-		Atu4356	0.28	+0.7
1,493,036	+		Atu4356	0.32	-0.3
1,493,044	-		Atu4356	0.33	-0.0
1,493,136	+		Atu4356	0.42	+0.1
1,493,137	-		Atu4356	0.42	-0.1
1,493,142	-		Atu4356	0.42	+0.1
1,493,258	+		Atu4356	0.54	+0.3
1,493,258	+		Atu4356	0.54	+1.9
1,493,258	+		Atu4356	0.54	-0.3
1,493,266	-		Atu4356	0.55	-0.5
1,493,266	-		Atu4356	0.55	+0.1
1,493,266	-		Atu4356	0.55	-0.8
1,493,271	+		Atu4356	0.55	+0.3
1,493,330	+		Atu4356	0.61	-0.1