Strain Fitness in Agrobacterium fabrum C58 around Atu2781
Experiment: Erythromycin 6.25 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Erythromycin 6.25 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,787,166 | - | +0.7 | |||
| 2,787,343 | - | Atu2782 | 0.14 | +0.1 | |
| 2,787,368 | - | Atu2782 | 0.18 | -0.1 | |
| 2,787,421 | + | Atu2782 | 0.27 | +0.3 | |
| 2,787,492 | - | Atu2782 | 0.39 | -0.1 | |
| 2,787,493 | - | Atu2782 | 0.40 | +0.3 | |
| 2,787,493 | - | Atu2782 | 0.40 | +0.1 | |
| 2,787,595 | + | Atu2782 | 0.57 | +0.6 | |
| 2,787,616 | + | Atu2782 | 0.60 | -0.2 | |
| 2,787,628 | + | Atu2782 | 0.62 | -1.2 | |
| 2,787,629 | + | Atu2782 | 0.63 | -1.1 | |
| 2,787,633 | + | Atu2782 | 0.63 | +0.1 | |
| 2,787,641 | - | Atu2782 | 0.65 | -0.7 | |
| 2,787,665 | - | Atu2782 | 0.69 | -0.0 | |
| 2,787,785 | + | Atu2782 | 0.89 | -0.2 | |
| 2,787,785 | + | Atu2782 | 0.89 | +1.4 | |
| 2,787,808 | + | -0.0 | |||
| 2,787,816 | - | +0.2 |
Or see this region's nucleotide sequence