Strain Fitness in Agrobacterium fabrum C58 around Atu1263

Experiment: Erythromycin 6.25 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Erythromycin 6.25 ug/mL
1,251,428	+				+0.3
1,251,773	+		Atu1262	0.67	+0.3
1,252,033	+				-1.1
1,252,236	+				+0.3
1,252,248	+				+0.3
1,252,248	+				+0.2
1,252,331	-				+0.2
1,252,376	+				+0.3
1,252,603	-		Atu1263	0.18	-0.0
1,252,668	-		Atu1263	0.21	-1.1
1,252,700	+		Atu1263	0.22	+0.6
1,252,891	+		Atu1263	0.31	-0.3
1,252,979	+		Atu1263	0.35	-0.4
1,253,092	-		Atu1263	0.40	-0.4
1,253,114	-		Atu1263	0.41	+0.2
1,253,231	-		Atu1263	0.47	-0.7
1,253,274	+		Atu1263	0.49	-0.3
1,253,302	+		Atu1263	0.50	-0.1
1,253,355	+		Atu1263	0.52	+0.4
1,253,493	-		Atu1263	0.58	-1.3
1,253,645	-		Atu1263	0.65	+0.8
1,253,671	+		Atu1263	0.67	+0.5
1,253,671	+		Atu1263	0.67	+0.6
1,253,779	-		Atu1263	0.71	+0.3
1,253,794	-		Atu1263	0.72	-0.5
1,253,817	+		Atu1263	0.73	+0.4
1,253,843	-		Atu1263	0.74	+0.3
1,253,856	+		Atu1263	0.75	+1.3
1,253,856	+		Atu1263	0.75	-0.4
1,253,856	+		Atu1263	0.75	-0.5
1,253,856	+		Atu1263	0.75	+1.3
1,253,856	+		Atu1263	0.75	+0.1
1,253,864	-		Atu1263	0.75	+0.1
1,253,864	-		Atu1263	0.75	+0.7
1,253,864	-		Atu1263	0.75	-0.7
1,253,864	-		Atu1263	0.75	+0.8
1,253,864	-		Atu1263	0.75	+0.8
1,253,864	-		Atu1263	0.75	-0.1
1,253,876	+		Atu1263	0.76	+0.6
1,253,899	+		Atu1263	0.77	+0.3
1,253,919	+		Atu1263	0.78	+0.2
1,253,937	+		Atu1263	0.79	-0.1
1,253,945	-		Atu1263	0.79	-0.7
1,253,945	-		Atu1263	0.79	+0.0
1,253,950	-		Atu1263	0.79	+0.9
1,253,976	-		Atu1263	0.80	-0.2
1,254,017	-		Atu1263	0.82	-0.4
1,254,099	+		Atu1263	0.86	-2.1
1,254,153	+		Atu1263	0.88	-0.7
1,254,269	-				-0.2
1,254,275	-				+0.7
1,254,275	-				+0.8
1,254,294	-				-0.2
1,254,380	-				+1.3
1,254,402	-				-0.4
1,254,595	+		Atu1264	0.40	+0.9
1,254,627	-		Atu1264	0.51	-0.1
1,254,642	-		Atu1264	0.56	-0.2
1,254,670	-		Atu1264	0.66	+0.3
1,254,670	-		Atu1264	0.66	-1.3
1,254,714	-		Atu1264	0.81	-0.7
1,254,887	-				-1.1
1,255,310	+				+1.4