Strain Fitness in Agrobacterium fabrum C58 around Atu1144
Experiment: Erythromycin 6.25 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Erythromycin 6.25 ug/mL |
---|---|---|---|---|---|
remove | |||||
1,132,148 | - | -0.4 | |||
1,132,916 | + | +0.3 | |||
1,132,934 | - | -0.8 | |||
1,132,970 | + | +0.8 | |||
1,132,978 | - | -0.6 | |||
1,133,033 | + | +0.5 | |||
1,133,680 | - | Atu1144 | 0.32 | +0.2 | |
1,134,083 | - | Atu1144 | 0.50 | -0.3 | |
1,134,145 | + | Atu1144 | 0.53 | +1.2 | |
1,136,096 | + | Atu1145 | 0.61 | +1.2 |
Or see this region's nucleotide sequence