Strain Fitness in Agrobacterium fabrum C58 around Atu4745

Experiment: Bethi_Library_OD1.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD1.0
1,913,301	+				-0.2
1,913,319	-				-1.5
1,913,355	-				-0.3
1,913,386	+				-0.9
1,913,410	+				-0.2
1,913,493	-		Atu4744	0.19	-1.6
1,913,521	+		Atu4744	0.22	+0.7
1,913,566	+		Atu4744	0.28	-1.0
1,913,603	-		Atu4744	0.32	-0.6
1,913,804	+		Atu4744	0.56	-0.1
1,913,812	-		Atu4744	0.56	+0.1
1,913,832	+		Atu4744	0.59	+0.4
1,914,084	-		Atu4744	0.88	+0.9
1,914,090	-		Atu4744	0.89	-2.4
1,914,100	-				+0.3
1,914,105	+				-0.3
1,914,119	+				+0.3
1,914,188	+				-0.3
1,914,188	+				-0.2
1,914,188	+				+0.4
1,914,313	-				+0.3
1,914,489	+		Atu4745	0.13	-0.4
1,914,541	+		Atu4745	0.16	+0.0
1,914,635	+		Atu4745	0.22	+0.3
1,914,635	+		Atu4745	0.22	+0.4
1,914,643	-		Atu4745	0.23	+1.8
1,914,643	-		Atu4745	0.23	-0.0
1,914,643	-		Atu4745	0.23	+0.2
1,914,646	+		Atu4745	0.23	+1.0
1,914,831	+		Atu4745	0.36	-0.0
1,914,849	+		Atu4745	0.37	+0.8
1,914,889	+		Atu4745	0.39	+0.5
1,915,022	-		Atu4745	0.48	+0.4
1,915,140	-		Atu4745	0.56	+0.3
1,915,214	-		Atu4745	0.61	-0.2
1,915,245	-		Atu4745	0.63	-0.2
1,915,495	+		Atu4745	0.80	+0.7
1,915,700	+				+1.0
1,915,700	+				+1.0
1,915,733	-				-0.2
1,915,791	+				+0.6
1,915,843	+				-0.0
1,915,874	-				-0.6
1,915,963	-		Atu4746	0.18	+0.5
1,916,019	-		Atu4746	0.23	+0.1
1,916,071	-		Atu4746	0.28	-0.9
1,916,203	+		Atu4746	0.41	-0.6
1,916,211	-		Atu4746	0.42	-0.0
1,916,214	+		Atu4746	0.42	-0.1
1,916,286	-		Atu4746	0.49	+0.3
1,916,325	-		Atu4746	0.53	+0.4
1,916,338	+		Atu4746	0.54	-0.4
1,916,338	+		Atu4746	0.54	-1.2
1,916,371	+		Atu4746	0.58	+0.2
1,916,371	+		Atu4746	0.58	+0.1
1,916,379	+		Atu4746	0.59	+0.6
1,916,538	+		Atu4746	0.74	-0.1
1,916,542	+		Atu4746	0.75	-1.0
1,916,550	-		Atu4746	0.75	-0.5
1,916,569	-		Atu4746	0.77	+0.4
1,916,588	+		Atu4746	0.79	-0.0
1,916,588	+		Atu4746	0.79	+0.5
1,916,634	+		Atu4746	0.84	-0.6
1,916,639	+		Atu4746	0.84	+0.4
1,916,764	+				+0.7