Strain Fitness in Agrobacterium fabrum C58 around Atu4401

Experiment: Bethi_Library_OD1.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD1.0
1,536,455	-		Atu4400	0.55	-0.6
1,536,470	+		Atu4400	0.56	-0.5
1,536,478	-		Atu4400	0.56	-0.1
1,536,575	+		Atu4400	0.61	-0.3
1,536,590	-		Atu4400	0.61	-0.5
1,536,634	-		Atu4400	0.63	-0.2
1,536,818	-		Atu4400	0.72	-1.4
1,536,865	-		Atu4400	0.74	+0.2
1,537,010	+		Atu4400	0.81	-0.1
1,537,018	-		Atu4400	0.81	-0.5
1,537,091	+		Atu4400	0.85	+0.2
1,537,207	+		Atu4400	0.90	+0.4
1,537,315	+				-0.1
1,537,316	+				-0.2
1,537,316	+				+2.0
1,537,324	-				-0.3
1,537,338	+				-0.3
1,537,356	-				+0.4
1,537,366	-				+1.4
1,537,433	+				-0.4
1,537,449	+				-0.6
1,537,449	+				-0.4
1,537,457	-				-0.4
1,537,493	+				-0.1
1,537,570	-		Atu4401	0.13	-2.0
1,537,574	+		Atu4401	0.13	-0.6
1,537,582	-		Atu4401	0.14	-0.3
1,537,656	+		Atu4401	0.22	-0.9
1,537,705	+		Atu4401	0.27	-0.3
1,537,737	+		Atu4401	0.30	-0.5
1,537,743	+		Atu4401	0.31	-0.3
1,537,751	-		Atu4401	0.31	-0.2
1,537,767	+		Atu4401	0.33	+1.0
1,537,770	-		Atu4401	0.33	-0.3
1,537,777	+		Atu4401	0.34	-0.6
1,537,777	+		Atu4401	0.34	-0.5
1,537,777	+		Atu4401	0.34	-0.2
1,537,777	+		Atu4401	0.34	+0.1
1,537,777	+		Atu4401	0.34	-0.5
1,537,777	+		Atu4401	0.34	-0.1
1,537,780	-		Atu4401	0.34	-0.6
1,537,785	-		Atu4401	0.35	-0.3
1,537,785	-		Atu4401	0.35	-0.3
1,537,785	-		Atu4401	0.35	+0.4
1,537,785	-		Atu4401	0.35	-1.0
1,537,785	-		Atu4401	0.35	-0.4
1,537,785	-		Atu4401	0.35	-0.4
1,537,785	-		Atu4401	0.35	+0.6
1,538,126	+		Atu4401	0.70	-2.2
1,538,139	-		Atu4401	0.71	+0.8
1,538,267	+		Atu4401	0.84	+0.0
1,538,428	+				-1.0
1,538,436	-				-0.3
1,538,560	-		Atu4402	0.16	-0.1
1,538,659	+		Atu4402	0.28	+0.8
1,538,703	-		Atu4402	0.34	-0.1
1,538,791	+		Atu4402	0.44	-0.6
1,538,874	+		Atu4402	0.55	-0.5
1,538,890	-		Atu4402	0.57	-1.0
1,538,979	+		Atu4402	0.68	-1.1
1,539,053	-		Atu4402	0.77	-0.4
1,539,099	+		Atu4402	0.82	-0.3
1,539,109	+		Atu4402	0.84	-0.2
1,539,117	-		Atu4402	0.85	+0.4
1,539,122	-		Atu4402	0.85	-1.2
1,539,122	-		Atu4402	0.85	+0.2
1,539,143	+		Atu4402	0.88	-0.2
1,539,143	+		Atu4402	0.88	-0.1
1,539,143	+		Atu4402	0.88	-0.4
1,539,151	-		Atu4402	0.89	-0.2
1,539,217	-				-1.0
1,539,219	+				-0.5
1,539,219	+				-0.1
1,539,227	-				+0.4
1,539,227	-				+0.5
1,539,259	+				-1.1
1,539,337	+		Atu4403	0.13	-2.1
1,539,418	+		Atu4403	0.24	+1.2
1,539,418	+		Atu4403	0.24	-0.0