Strain Fitness in Agrobacterium fabrum C58 around Atu1069

Experiment: Bethi_Library_OD1.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD1.0
1,061,293	-		Atu1068	0.50	-0.0
1,061,449	+		Atu1068	0.67	-0.1
1,061,465	-		Atu1068	0.69	+0.3
1,061,536	-		Atu1068	0.77	+0.7
1,061,536	-		Atu1068	0.77	+0.3
1,061,560	-		Atu1068	0.79	-0.0
1,061,678	-				-0.9
1,061,678	-				-0.1
1,061,750	-				+0.2
1,061,752	-				+0.3
1,061,783	-				-0.3
1,062,032	+				-1.1
1,062,086	-		Atu1069	0.12	-0.2
1,062,091	-		Atu1069	0.12	-0.3
1,062,097	+		Atu1069	0.13	-0.3
1,062,119	+		Atu1069	0.15	+0.3
1,062,255	+		Atu1069	0.29	-0.6
1,062,327	+		Atu1069	0.37	-0.3
1,062,496	-		Atu1069	0.54	-0.1
1,062,496	-		Atu1069	0.54	+1.4
1,062,510	+		Atu1069	0.56	-0.2
1,062,518	-		Atu1069	0.57	-0.3
1,062,526	+		Atu1069	0.58	-0.6
1,062,669	+		Atu1069	0.73	-0.2
1,062,677	-		Atu1069	0.73	+0.4
1,062,740	-		Atu1069	0.80	-0.2
1,062,774	-		Atu1069	0.83	-0.7
1,062,846	-				+0.5
1,062,912	-				-0.1
1,062,927	-				-1.0
1,062,990	-		Atu1070	0.12	+1.6
1,063,013	+		Atu1070	0.17	+0.3
1,063,032	+		Atu1070	0.21	-0.5
1,063,034	-		Atu1070	0.22	-0.0
1,063,096	+		Atu1070	0.35	+0.3
1,063,104	-		Atu1070	0.37	+0.3
1,063,144	+		Atu1070	0.46	+0.1
1,063,154	+		Atu1070	0.48	+0.3
1,063,211	-		Atu1070	0.60	-0.0
1,063,213	+		Atu1070	0.61	-1.2
1,063,469	+		Atu1071	0.16	+0.2
1,063,473	+		Atu1071	0.17	-1.9
1,063,507	+		Atu1071	0.24	+0.5
1,063,515	-		Atu1071	0.26	+0.5
1,063,627	+		Atu1071	0.49	-0.7
1,063,635	-		Atu1071	0.51	-0.0
1,063,783	+		Atu1071	0.82	+1.1
1,063,798	+		Atu1071	0.85	-0.3
1,063,798	+		Atu1071	0.85	-0.3
1,063,852	+				-0.3
1,063,909	+		Atu1072	0.12	-0.1