Strain Fitness in Agrobacterium fabrum C58 around Atu0115

Experiment: Bethi_Library_OD1.0

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD1.0
119,792	+		Atu0114	0.30	+1.2
119,832	+		Atu0114	0.33	+0.2
119,835	-		Atu0114	0.34	-0.1
119,921	+		Atu0114	0.40	-2.0
119,923	-		Atu0114	0.40	+1.5
120,077	+		Atu0114	0.52	-0.1
120,098	+		Atu0114	0.53	-0.8
120,125	-		Atu0114	0.55	-0.5
120,273	+		Atu0114	0.66	-0.3
120,291	-		Atu0114	0.67	-0.1
120,405	+		Atu0114	0.76	-0.2
120,415	-		Atu0114	0.77	-0.4
120,821	-		Atu0115	0.45	-0.9
120,945	-				-0.8
120,999	-				-0.1
121,001	+				-0.3
121,009	-				-0.4
121,009	-				-0.7
121,034	+				-0.4
121,063	+				-1.0
121,104	+				+0.0
121,191	+				+0.4
121,191	+				-1.1
121,199	-				-1.5
121,199	-				+0.8
121,260	-				+1.5
121,363	-				-0.3
121,381	+				+0.1
121,381	+				-2.1
121,426	-				+0.1
121,466	-				-1.8
121,476	-				-0.3
121,499	+				-0.1
121,507	-				+0.5
121,525	+				-0.8
121,565	-		Atu0116	0.15	+0.4
121,581	-		Atu0116	0.19	-2.0
121,677	+		Atu0116	0.43	+0.2
121,713	-		Atu0116	0.51	-0.4
121,735	+		Atu0116	0.57	+0.2
121,743	-		Atu0116	0.59	+0.0
121,771	-		Atu0116	0.65	-0.8