Strain Fitness in Agrobacterium fabrum C58 around Atu5108

Experiment: Bethi_Library_OD0.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.5
112,559	-		Atu5106	0.71	+0.3
112,702	-				+0.0
112,780	-		Atu5107	0.24	-0.7
112,858	-		Atu5107	0.49	+0.2
112,891	+		Atu5107	0.59	+0.8
112,982	-		Atu5107	0.88	+0.3
113,018	-				-0.3
113,074	-				-2.2
113,130	-				-0.2
113,155	+				+0.8
113,183	+				+0.4
113,188	+				-1.3
113,199	-				-0.4
113,294	+				-0.1
113,369	+				+0.4
113,374	+				+0.5
113,383	-				-1.2
113,383	-				-0.2
113,426	+				-0.0
113,476	+				-0.2
113,479	-				+0.1
113,493	+				+0.5
113,634	+				-1.3
113,644	+				-0.1
113,786	-		Atu5108	0.13	+0.9
113,810	+		Atu5108	0.14	+0.4
113,819	-		Atu5108	0.15	-1.8
113,839	+		Atu5108	0.16	+0.6
113,929	+		Atu5108	0.20	+0.8
113,956	+		Atu5108	0.22	+1.3
113,984	+		Atu5108	0.23	+1.3
114,029	-		Atu5108	0.26	-0.0
114,061	+		Atu5108	0.27	-0.7
114,209	-		Atu5108	0.35	-0.0
114,209	-		Atu5108	0.35	+0.5
114,333	-		Atu5108	0.41	+0.1
114,410	-		Atu5108	0.45	+0.2
114,416	+		Atu5108	0.46	+0.5
114,424	-		Atu5108	0.46	+0.8
114,424	-		Atu5108	0.46	+0.4
114,584	-		Atu5108	0.54	+0.8
114,584	-		Atu5108	0.54	+0.6
114,596	+		Atu5108	0.55	-0.3
114,767	+		Atu5108	0.64	+0.8
114,776	-		Atu5108	0.64	+0.3
114,812	+		Atu5108	0.66	-0.2
114,827	-		Atu5108	0.67	+0.2
114,912	-		Atu5108	0.72	+0.6
114,950	+		Atu5108	0.74	+0.1
115,017	-		Atu5108	0.77	-0.3
115,046	-		Atu5108	0.79	+0.7
115,140	+		Atu5108	0.83	+0.1
115,162	-		Atu5108	0.85	-0.0
115,363	-				-0.3
115,511	+		Atu5109	0.24	-0.0
115,519	-		Atu5109	0.28	+0.4
115,543	+		Atu5109	0.38	-0.3
115,608	+		Atu5109	0.66	+0.1
115,621	-		Atu5109	0.71	-0.0
115,673	-				-1.1
115,680	+				+0.7
115,701	+				-0.3
115,779	+		Atu5110	0.35	-0.4
116,049	-				+2.0
116,142	+				+0.2
116,224	+				-0.3
116,291	+				-0.0
116,310	-				-0.7
116,325	+				+0.1
116,343	+				-0.3
116,372	-				+0.8