Strain Fitness in Agrobacterium fabrum C58 around Atu4629

Experiment: Bethi_Library_OD0.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.5
1,778,458	+		Atu4628	0.68	+0.5
1,778,496	+		Atu4628	0.69	-1.1
1,778,542	+		Atu4628	0.71	-0.3
1,778,746	+		Atu4628	0.80	-0.4
1,778,774	+		Atu4628	0.81	+0.3
1,778,850	+		Atu4628	0.84	+0.0
1,778,889	+		Atu4628	0.86	-0.9
1,778,891	-		Atu4628	0.86	+0.0
1,778,928	-		Atu4628	0.88	-0.5
1,778,942	+		Atu4628	0.88	-1.3
1,778,942	+		Atu4628	0.88	+0.1
1,778,942	+		Atu4628	0.88	+0.3
1,778,950	-		Atu4628	0.89	+0.9
1,778,990	+				+2.1
1,779,050	-				+0.1
1,779,121	+				+0.1
1,779,123	+				+0.2
1,779,129	-				-0.3
1,779,129	-				-0.1
1,779,131	-				-0.2
1,779,139	+				-0.5
1,779,141	-				-2.0
1,779,156	-				-0.1
1,779,338	+				-0.0
1,779,346	-				-0.9
1,779,346	-				-0.0
1,779,352	+				-1.0
1,779,430	+				+0.1
1,779,438	-				-0.0
1,779,547	+		Atu4629	0.14	-0.2
1,779,582	+		Atu4629	0.18	+0.0
1,779,772	+		Atu4629	0.39	+0.5
1,779,843	-		Atu4629	0.47	+0.4
1,779,869	+		Atu4629	0.50	+0.9
1,779,928	-		Atu4629	0.57	+1.4
1,779,933	-		Atu4629	0.57	-0.1
1,779,933	-		Atu4629	0.57	-0.0
1,779,951	-		Atu4629	0.59	+0.2
1,779,977	-		Atu4629	0.62	-0.1
1,779,986	+		Atu4629	0.63	+0.3
1,780,140	-		Atu4629	0.81	+1.4
1,780,167	+		Atu4629	0.84	+0.5
1,780,209	-		Atu4629	0.88	+0.4
1,780,209	-		Atu4629	0.88	-0.4
1,780,211	+		Atu4629	0.88	+1.1
1,780,302	+				+0.3
1,780,311	-				-0.3
1,780,348	-				+1.1
1,780,439	+		Atu4630	0.29	+0.4
1,780,447	-		Atu4630	0.32	-0.7
1,780,598	+		Atu4630	0.84	+0.1
1,780,606	-		Atu4630	0.87	+1.7
1,780,623	+				-0.1
1,780,623	+				-0.1
1,780,623	+				-0.2
1,780,623	+				+0.4
1,780,631	-				-0.0
1,780,631	-				-0.2
1,780,753	+		Atu4631	0.14	+0.2
1,780,828	+		Atu4631	0.23	+0.1
1,780,828	+		Atu4631	0.23	-0.4
1,780,828	+		Atu4631	0.23	+0.1
1,780,831	-		Atu4631	0.23	+0.3
1,780,836	-		Atu4631	0.24	-0.5
1,780,836	-		Atu4631	0.24	+0.1
1,780,965	-		Atu4631	0.39	-0.5
1,781,051	+		Atu4631	0.49	-0.9
1,781,096	+		Atu4631	0.55	-0.5
1,781,104	-		Atu4631	0.56	-0.4
1,781,299	+		Atu4631	0.79	-0.4