Strain Fitness in Agrobacterium fabrum C58 around Atu4023

Experiment: Bethi_Library_OD0.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.5
1,136,833	+		Atu4022	0.56	+1.5
1,136,845	+		Atu4022	0.56	-0.5
1,136,871	-		Atu4022	0.57	+0.7
1,136,872	+		Atu4022	0.57	-0.9
1,136,890	-		Atu4022	0.58	+0.2
1,136,909	-		Atu4022	0.59	-0.3
1,136,918	+		Atu4022	0.60	+0.3
1,136,918	+		Atu4022	0.60	+0.1
1,136,926	-		Atu4022	0.60	-0.3
1,136,926	-		Atu4022	0.60	+0.1
1,136,976	-		Atu4022	0.62	-0.0
1,137,027	+		Atu4022	0.65	-0.4
1,137,041	+		Atu4022	0.65	-0.3
1,137,089	-		Atu4022	0.68	-0.1
1,137,244	+		Atu4022	0.75	-0.3
1,137,293	-		Atu4022	0.77	+0.9
1,137,326	+		Atu4022	0.79	+0.3
1,137,338	+		Atu4022	0.79	+0.2
1,137,401	-		Atu4022	0.82	+0.1
1,137,401	-		Atu4022	0.82	-1.6
1,137,418	-		Atu4022	0.83	-0.2
1,137,419	+		Atu4022	0.83	+0.2
1,137,419	+		Atu4022	0.83	+0.4
1,137,425	-		Atu4022	0.83	-1.1
1,137,427	-		Atu4022	0.83	+0.3
1,137,427	-		Atu4022	0.83	-1.2
1,137,442	-		Atu4022	0.84	-0.4
1,137,442	-		Atu4022	0.84	+0.9
1,137,461	+		Atu4022	0.85	-0.0
1,137,469	-		Atu4022	0.85	+0.6
1,137,484	-		Atu4022	0.86	+1.0
1,137,486	+		Atu4022	0.86	-0.0
1,137,503	+		Atu4022	0.87	-0.9
1,137,511	-		Atu4022	0.87	-0.7
1,137,620	-				-0.4
1,137,666	+				-0.0
1,137,735	-				-0.3
1,137,736	+				-0.4
1,137,741	+				-0.4
1,137,757	-				-0.3
1,137,771	-				+0.9
1,137,779	+				+0.1
1,137,779	+				+0.3
1,137,787	-				-0.0
1,137,844	-				+0.4
1,137,906	-				-0.8
1,137,912	-				-0.1
1,137,964	+		Atu4023	0.15	+0.1
1,138,009	+		Atu4023	0.21	+0.7
1,138,174	+		Atu4023	0.39	+1.1
1,138,340	-		Atu4023	0.58	+1.7
1,138,425	-		Atu4023	0.68	+0.3
1,138,502	-		Atu4023	0.76	-1.0
1,138,551	+		Atu4023	0.82	+0.8
1,138,551	+		Atu4023	0.82	+0.0
1,138,600	+		Atu4023	0.88	+0.4
1,138,611	-		Atu4023	0.89	-0.1
1,138,667	+				+0.3
1,138,667	+				+1.3
1,138,667	+				+1.1
1,138,675	-				+0.0
1,138,675	-				+1.1
1,138,694	+				+0.1
1,138,769	-				-1.9
1,138,769	-				+0.4
1,138,860	+				-1.5
1,138,870	+				-0.2
1,139,128	+		Atu4024	0.21	-1.0
1,139,181	-		Atu4024	0.24	-1.6
1,139,186	+		Atu4024	0.24	+0.1
1,139,186	+		Atu4024	0.24	-0.5
1,139,248	+		Atu4024	0.28	-0.2
1,139,306	+		Atu4024	0.31	+0.2
1,139,314	-		Atu4024	0.31	+0.3
1,139,347	-		Atu4024	0.33	+0.1
1,139,432	+		Atu4024	0.37	-0.3
1,139,543	+		Atu4024	0.43	+2.9
1,139,545	+		Atu4024	0.43	-0.7
1,139,568	-		Atu4024	0.44	-0.5