Experiment: Bethi_Library_OD0.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3482 and Atu3483 overlap by 4 nucleotides Atu3483 and Atu3484 are separated by 34 nucleotides
Atu3482: Atu3482 - pantoate--beta-alanine ligase, at 531,140 to 532,018
Atu3482
Atu3483: Atu3483 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 532,015 to 532,854
Atu3483
Atu3484: Atu3484 - hypothetical protein, at 532,889 to 534,181
Atu3484
Position (kb) 532
533 Strain fitness (log2 ratio) -1
0
1 at 531.060 kb on - strand at 531.092 kb on + strand at 531.223 kb on + strand at 531.276 kb on - strand, within Atu3482 at 531.422 kb on - strand, within Atu3482 at 531.446 kb on + strand, within Atu3482 at 531.586 kb on + strand, within Atu3482 at 531.628 kb on - strand, within Atu3482 at 531.628 kb on - strand, within Atu3482 at 531.628 kb on - strand, within Atu3482 at 531.710 kb on - strand, within Atu3482 at 531.772 kb on + strand, within Atu3482 at 531.923 kb on - strand, within Atu3482 at 532.099 kb on - strand, within Atu3483 at 532.169 kb on + strand, within Atu3483 at 532.320 kb on + strand, within Atu3483 at 532.479 kb on - strand, within Atu3483 at 532.609 kb on - strand, within Atu3483 at 532.767 kb on + strand, within Atu3483 at 533.076 kb on + strand, within Atu3484 at 533.076 kb on + strand, within Atu3484 at 533.084 kb on - strand, within Atu3484 at 533.228 kb on - strand, within Atu3484 at 533.474 kb on + strand, within Atu3484 at 533.480 kb on + strand, within Atu3484 at 533.483 kb on - strand, within Atu3484 at 533.556 kb on + strand, within Atu3484 at 533.558 kb on + strand, within Atu3484
Per-strain Table
Position Strand Gene LocusTag Fraction Bethi_Library_OD0.5 remove 531,060 - -1.0 531,092 + +0.7 531,223 + +0.0 531,276 - Atu3482 0.15 -0.4 531,422 - Atu3482 0.32 +0.5 531,446 + Atu3482 0.35 +0.4 531,586 + Atu3482 0.51 +0.6 531,628 - Atu3482 0.56 +0.0 531,628 - Atu3482 0.56 +0.0 531,628 - Atu3482 0.56 +1.6 531,710 - Atu3482 0.65 +0.0 531,772 + Atu3482 0.72 +0.7 531,923 - Atu3482 0.89 +0.8 532,099 - Atu3483 0.10 +0.1 532,169 + Atu3483 0.18 +1.5 532,320 + Atu3483 0.36 +0.5 532,479 - Atu3483 0.55 +0.9 532,609 - Atu3483 0.71 -0.3 532,767 + Atu3483 0.90 -0.6 533,076 + Atu3484 0.14 -0.3 533,076 + Atu3484 0.14 +1.6 533,084 - Atu3484 0.15 -0.7 533,228 - Atu3484 0.26 +0.2 533,474 + Atu3484 0.45 -0.0 533,480 + Atu3484 0.46 -0.1 533,483 - Atu3484 0.46 +0.1 533,556 + Atu3484 0.52 +0.2 533,558 + Atu3484 0.52 -0.5
Or see this region's nucleotide sequence