Strain Fitness in Agrobacterium fabrum C58 around Atu2742

Experiment: Bethi_Library_OD0.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.5
2,738,388	+		Atu2741	0.26	+0.6
2,738,403	-		Atu2741	0.28	-0.5
2,738,425	+		Atu2741	0.30	-0.5
2,738,435	+		Atu2741	0.30	+0.1
2,738,435	+		Atu2741	0.30	-0.1
2,738,435	+		Atu2741	0.30	+0.1
2,738,435	+		Atu2741	0.30	+0.8
2,738,435	+		Atu2741	0.30	+0.5
2,738,443	-		Atu2741	0.31	-0.4
2,738,443	-		Atu2741	0.31	+0.3
2,738,443	-		Atu2741	0.31	+0.2
2,738,443	-		Atu2741	0.31	-0.3
2,738,443	-		Atu2741	0.31	+0.0
2,738,443	-		Atu2741	0.31	+1.3
2,738,443	-		Atu2741	0.31	+0.0
2,738,449	-		Atu2741	0.32	-0.9
2,738,639	-		Atu2741	0.48	-0.7
2,738,680	-		Atu2741	0.52	+0.5
2,738,692	+		Atu2741	0.53	-0.4
2,738,692	+		Atu2741	0.53	+0.4
2,738,786	-		Atu2741	0.61	+0.5
2,738,819	+		Atu2741	0.63	-0.3
2,738,892	-		Atu2741	0.70	+0.3
2,738,997	+		Atu2741	0.79	+1.3
2,739,053	-		Atu2741	0.84	-0.1
2,739,091	+		Atu2741	0.87	-0.1
2,739,101	+		Atu2741	0.88	-0.2
2,739,101	+		Atu2741	0.88	-0.2
2,739,109	-		Atu2741	0.88	-0.5
2,739,109	-		Atu2741	0.88	+0.7
2,739,109	-		Atu2741	0.88	-0.1
2,739,109	-		Atu2741	0.88	+0.6
2,739,157	+				+0.7
2,739,157	+				+0.3
2,739,183	+				-0.4
2,739,236	+				+0.5
2,739,236	+				-0.1
2,739,236	+				+1.1
2,739,236	+				+0.3
2,739,236	+				+0.5
2,739,236	+				-0.1
2,739,236	+				-0.2
2,739,244	-				-0.3
2,739,244	-				+0.1
2,739,244	-				-0.5
2,739,244	-				-0.2
2,739,244	-				-0.1
2,739,244	-				+0.2
2,739,296	+				+0.3
2,739,305	+				-0.7
2,739,539	+		Atu2742	0.34	-1.0
2,739,539	+		Atu2742	0.34	+0.4
2,739,539	+		Atu2742	0.34	-0.8
2,739,547	-		Atu2742	0.35	+0.8
2,739,547	-		Atu2742	0.35	+0.2
2,739,547	-		Atu2742	0.35	+0.2
2,739,626	-		Atu2742	0.50	-0.3
2,739,667	-		Atu2742	0.58	+1.3
2,739,675	+		Atu2742	0.60	+0.3
2,739,675	+		Atu2742	0.60	+0.2
2,739,683	-		Atu2742	0.61	+1.7
2,739,713	+		Atu2742	0.67	+1.2
2,739,716	+		Atu2742	0.67	+0.0
2,739,829	+		Atu2742	0.89	+0.6
2,739,923	+				-0.2
2,740,012	-				+0.3
2,740,012	-				-0.1
2,740,012	-				-0.1
2,740,059	-		Atu2743	0.13	-0.2
2,740,059	-		Atu2743	0.13	-0.1
2,740,064	+		Atu2743	0.13	+0.0
2,740,152	+		Atu2743	0.20	-2.4
2,740,245	-		Atu2743	0.27	+1.1
2,740,484	+		Atu2743	0.46	+1.3
2,740,484	+		Atu2743	0.46	-1.0
2,740,484	+		Atu2743	0.46	-1.2
2,740,486	-		Atu2743	0.46	+0.5
2,740,492	-		Atu2743	0.47	+0.2
2,740,492	-		Atu2743	0.47	-0.3
2,740,492	-		Atu2743	0.47	-0.2
2,740,496	+		Atu2743	0.47	-0.5
2,740,496	+		Atu2743	0.47	-0.2
2,740,504	-		Atu2743	0.48	+0.0
2,740,504	-		Atu2743	0.48	-0.1
2,740,680	+		Atu2743	0.62	-0.2
2,740,685	+		Atu2743	0.62	+0.0
2,740,715	-		Atu2743	0.64	+0.5
2,740,746	+		Atu2743	0.67	-0.7
2,740,754	-		Atu2743	0.67	+0.3
2,740,754	-		Atu2743	0.67	+0.2
2,740,756	+		Atu2743	0.67	+0.3
2,740,773	+		Atu2743	0.69	-1.2
2,740,800	+		Atu2743	0.71	+0.5
2,740,808	-		Atu2743	0.72	-1.0
2,740,868	+		Atu2743	0.76	-0.4
2,740,878	+		Atu2743	0.77	-0.2