Strain Fitness in Agrobacterium fabrum C58 around Atu2602

Experiment: Bethi_Library_OD0.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.5
2,580,585	-		Atu2601	0.26	+0.4
2,580,605	+		Atu2601	0.28	+1.3
2,580,613	-		Atu2601	0.28	-0.7
2,580,687	+		Atu2601	0.34	-0.3
2,580,708	-		Atu2601	0.36	+0.4
2,580,717	-		Atu2601	0.37	+0.1
2,580,727	-		Atu2601	0.38	+0.2
2,580,814	+		Atu2601	0.45	-0.5
2,580,814	+		Atu2601	0.45	-0.7
2,580,870	-		Atu2601	0.49	-0.5
2,580,892	-		Atu2601	0.51	+0.0
2,580,915	-		Atu2601	0.53	+0.5
2,580,939	+		Atu2601	0.55	+0.5
2,581,003	+		Atu2601	0.60	+0.1
2,581,046	-		Atu2601	0.64	-0.8
2,581,102	-		Atu2601	0.68	+0.8
2,581,203	+		Atu2601	0.76	-0.5
2,581,222	+		Atu2601	0.78	+2.3
2,581,273	+		Atu2601	0.82	-0.6
2,581,332	-		Atu2601	0.87	-0.5
2,581,360	+		Atu2601	0.89	+0.6
2,581,391	+				+1.9
2,581,465	+				+0.3
2,581,482	+				+0.7
2,581,612	-				+0.3
2,581,710	-		Atu2602	0.21	+0.4
2,581,810	-		Atu2602	0.32	+1.3
2,581,827	-		Atu2602	0.34	+0.2
2,581,954	+		Atu2602	0.49	+0.3
2,581,962	-		Atu2602	0.50	+0.3
2,581,962	-		Atu2602	0.50	+0.3
2,581,998	+		Atu2602	0.54	+0.8
2,582,082	+		Atu2602	0.64	+0.3
2,582,082	+		Atu2602	0.64	-0.0
2,582,091	-		Atu2602	0.65	+0.1
2,582,118	-		Atu2602	0.68	+0.4
2,582,185	-		Atu2602	0.76	+2.1
2,582,189	-		Atu2602	0.76	+0.3
2,582,224	-		Atu2602	0.81	-0.7
2,582,235	-		Atu2602	0.82	-1.3
2,582,237	-		Atu2602	0.82	-1.3
2,582,281	-		Atu2602	0.87	+0.3
2,582,462	+				-1.3
2,582,470	-				-1.2
2,582,673	+		Atu2603	0.32	+0.2
2,582,683	+		Atu2603	0.33	-1.3
2,582,774	+		Atu2603	0.44	+0.7
2,582,900	-		Atu2603	0.58	-0.0
2,582,961	+		Atu2603	0.65	-0.1
2,582,986	-		Atu2603	0.68	-0.6
2,583,006	+		Atu2603	0.70	+0.5
2,583,009	-		Atu2603	0.70	+0.3
2,583,276	-				-0.5
2,583,283	+				-0.3
2,583,291	-				+0.7
2,583,291	-				+0.3
2,583,315	-				-0.2
2,583,315	-				-0.5
2,583,326	+				-0.0
2,583,326	+				+0.9
2,583,334	-				+0.4