Strain Fitness in Agrobacterium fabrum C58 around Atu1995

Experiment: Bethi_Library_OD0.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.5
1,957,553	-		Atu1993	0.44	+0.7
1,957,743	+		Atu1993	0.65	-0.3
1,957,771	+		Atu1993	0.68	-0.1
1,957,856	+		Atu1993	0.78	-1.3
1,957,880	-		Atu1993	0.80	+0.1
1,957,903	+		Atu1993	0.83	+0.7
1,957,905	+		Atu1993	0.83	-0.4
1,957,971	+				-0.9
1,957,980	-				+0.1
1,958,080	-				-0.3
1,958,281	-		Atu1994	0.38	+0.4
1,958,318	-		Atu1994	0.48	-0.3
1,958,354	+		Atu1994	0.57	-0.2
1,958,357	-		Atu1994	0.58	-0.4
1,958,403	+		Atu1994	0.69	+0.3
1,958,403	+		Atu1994	0.69	+0.5
1,958,503	-				+0.1
1,958,503	-				+0.4
1,958,595	+		Atu1995	0.11	+1.3
1,958,595	+		Atu1995	0.11	-0.1
1,958,609	-		Atu1995	0.14	-0.1
1,958,667	-		Atu1995	0.23	-0.9
1,958,674	-		Atu1995	0.25	-0.5
1,958,679	-		Atu1995	0.25	-0.4
1,958,735	-		Atu1995	0.35	+0.3
1,958,890	-		Atu1995	0.61	-0.5
1,958,938	+		Atu1995	0.69	+2.1
1,958,938	+		Atu1995	0.69	-0.9
1,958,938	+		Atu1995	0.69	-0.4
1,958,946	-		Atu1995	0.70	+1.0
1,958,946	-		Atu1995	0.70	+0.3
1,958,954	-		Atu1995	0.72	-0.7
1,958,970	+		Atu1995	0.74	+0.7
1,959,000	+		Atu1995	0.79	+0.3
1,959,010	+		Atu1995	0.81	+1.0
1,959,013	-		Atu1995	0.82	+0.8
1,959,013	-		Atu1995	0.82	+1.7
1,959,080	-				+0.4
1,959,102	+				+0.8
1,959,102	+				+1.0
1,959,110	-				+0.8
1,959,225	-		Atu1996	0.17	-2.0
1,959,275	+		Atu1996	0.27	+0.2
1,959,295	-		Atu1996	0.31	-0.4
1,959,356	+		Atu1996	0.43	+0.6
1,959,356	+		Atu1996	0.43	-0.3
1,959,356	+		Atu1996	0.43	+0.1
1,959,371	+		Atu1996	0.46	+0.9
1,959,418	+		Atu1996	0.56	-1.4
1,959,479	+		Atu1996	0.68	+0.4
1,959,487	-		Atu1996	0.69	+0.0
1,959,582	-		Atu1996	0.89	-1.1
1,959,591	+				-0.0
1,959,623	+				-0.7
1,959,664	+				-0.0
1,959,753	-				+0.8
1,959,810	-		Atu1997	0.12	+0.5
1,959,847	+		Atu1997	0.15	-0.2
1,959,894	+		Atu1997	0.19	+0.1
1,959,994	+		Atu1997	0.26	+0.1
1,960,087	-		Atu1997	0.33	-0.9
1,960,103	+		Atu1997	0.34	+0.3
1,960,105	-		Atu1997	0.34	-1.8