Strain Fitness in Agrobacterium fabrum C58 around Atu4749

Experiment: Bethi_Library_OD0.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.5
1,917,716	-				-0.8
1,917,779	+				+0.2
1,917,820	+				-0.0
1,918,002	-		Atu4748	0.24	+0.2
1,918,003	+		Atu4748	0.25	-0.3
1,918,057	+		Atu4748	0.31	+0.0
1,918,057	+		Atu4748	0.31	-0.6
1,918,057	+		Atu4748	0.31	+0.5
1,918,065	-		Atu4748	0.32	+0.1
1,918,090	+		Atu4748	0.35	-0.4
1,918,258	-		Atu4748	0.54	-0.4
1,918,306	-		Atu4748	0.60	-1.7
1,918,483	+		Atu4748	0.81	-0.6
1,918,491	-		Atu4748	0.82	-0.5
1,918,491	-		Atu4748	0.82	-1.8
1,918,572	+				-0.1
1,918,572	+				+0.4
1,918,575	-				-0.0
1,918,582	-				-1.2
1,918,596	+				-0.6
1,918,603	-				-0.1
1,918,617	+				+0.0
1,918,625	-				-0.8
1,918,837	-		Atu4749	0.23	-0.4
1,918,838	-		Atu4749	0.23	-1.4
1,918,917	+		Atu4749	0.35	-0.9
1,918,932	+		Atu4749	0.38	+0.5
1,918,939	+		Atu4749	0.39	-1.3
1,918,984	-		Atu4749	0.45	-0.5
1,919,095	+		Atu4749	0.62	-0.6
1,919,218	+		Atu4749	0.81	+0.9
1,919,285	+				+0.0
1,919,380	-				+0.2
1,919,426	+				+0.1
1,919,426	+				+1.5
1,919,434	-				-0.5
1,919,505	-		Atu4750	0.11	-0.4
1,919,518	+		Atu4750	0.12	+0.8
1,919,587	-		Atu4750	0.20	-0.2
1,919,587	-		Atu4750	0.20	+1.2
1,919,706	+		Atu4750	0.34	+0.3
1,919,797	+		Atu4750	0.44	-0.5
1,919,842	+		Atu4750	0.49	-0.8
1,919,854	+		Atu4750	0.51	-0.3
1,919,854	+		Atu4750	0.51	+0.1
1,919,862	-		Atu4750	0.52	-0.8
1,919,896	-		Atu4750	0.56	-0.6
1,919,931	+		Atu4750	0.60	+0.3
1,919,962	-		Atu4750	0.63	+0.0
1,919,977	-		Atu4750	0.65	+0.3
1,920,074	-		Atu4750	0.76	-0.1
1,920,097	+		Atu4750	0.79	+1.2
1,920,157	-		Atu4750	0.86	+0.5
1,920,251	+				+0.6
1,920,328	+				+0.2
1,920,338	+				-0.1