Strain Fitness in Agrobacterium fabrum C58 around Atu4596

Experiment: Bethi_Library_OD0.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.5
1,741,170	+				-0.7
1,741,212	-				+0.1
1,741,306	+		Atu4595	0.17	+0.0
1,741,311	+		Atu4595	0.18	-0.9
1,741,343	-		Atu4595	0.22	-0.4
1,741,514	-		Atu4595	0.45	+0.9
1,741,591	-		Atu4595	0.55	+0.3
1,741,714	+		Atu4595	0.72	+0.5
1,741,752	+		Atu4595	0.77	-0.0
1,741,950	+				+0.5
1,741,963	-				+0.5
1,741,963	-				-0.2
1,742,072	-				-0.5
1,742,381	+		Atu4596	0.40	-0.1
1,742,458	+		Atu4596	0.48	+0.4
1,742,536	-		Atu4596	0.55	-0.6
1,742,553	+		Atu4596	0.57	-0.2
1,742,571	-		Atu4596	0.59	-0.5
1,742,599	+		Atu4596	0.62	-2.0
1,742,642	+		Atu4596	0.66	-0.7
1,742,650	-		Atu4596	0.67	-0.1
1,742,650	-		Atu4596	0.67	-1.0
1,742,650	-		Atu4596	0.67	+0.1
1,742,738	+		Atu4596	0.76	-0.1
1,742,756	-		Atu4596	0.78	-2.1
1,742,767	+		Atu4596	0.79	-1.7
1,742,767	+		Atu4596	0.79	-0.1
1,742,767	+		Atu4596	0.79	-0.5
1,742,767	+		Atu4596	0.79	-1.6
1,742,775	-		Atu4596	0.80	-1.4
1,742,775	-		Atu4596	0.80	-0.2
1,742,842	+		Atu4596	0.86	-0.1
1,742,887	+				-0.4
1,742,921	+				-1.8
1,742,922	-				-1.1
1,742,947	+				+0.5
1,742,966	+				-0.3
1,743,110	+		Atu4597	0.13	+0.0
1,743,162	-		Atu4597	0.19	+0.1
1,743,189	+		Atu4597	0.22	+0.5
1,743,197	-		Atu4597	0.23	-0.0
1,743,232	-		Atu4597	0.28	-0.9
1,743,235	+		Atu4597	0.28	+0.3
1,743,235	+		Atu4597	0.28	-0.9
1,743,243	-		Atu4597	0.29	-0.7
1,743,294	+		Atu4597	0.35	+0.3
1,743,446	+		Atu4597	0.54	-0.0
1,743,454	-		Atu4597	0.55	+0.1
1,743,498	+		Atu4597	0.61	-1.3
1,743,533	+		Atu4597	0.65	-0.7
1,743,600	+		Atu4597	0.74	-0.8
1,743,608	-		Atu4597	0.75	-1.2
1,743,657	+		Atu4597	0.81	+0.1
1,743,666	-		Atu4597	0.82	-0.0
1,743,689	-		Atu4597	0.85	+0.8
1,743,774	+				+0.5
1,743,974	+				-0.9