Strain Fitness in Agrobacterium fabrum C58 around Atu4533

Experiment: Bethi_Library_OD0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.1
1,679,521	+		Atu4531	0.88	-0.8
1,679,551	-				-0.3
1,679,551	-				+1.2
1,679,677	-		Atu4532	0.12	+1.2
1,679,700	+		Atu4532	0.15	-0.9
1,679,838	-		Atu4532	0.31	-0.6
1,679,848	+		Atu4532	0.32	-0.3
1,679,851	-		Atu4532	0.32	-1.6
1,679,856	-		Atu4532	0.33	-0.7
1,679,875	-		Atu4532	0.35	-0.3
1,679,977	-		Atu4532	0.47	-0.7
1,680,040	+		Atu4532	0.54	-0.6
1,680,160	-		Atu4532	0.68	-0.1
1,680,212	-		Atu4532	0.74	-0.3
1,680,214	-		Atu4532	0.74	-0.3
1,680,258	+		Atu4532	0.79	-0.0
1,680,292	-		Atu4532	0.83	-0.3
1,680,362	+				-0.7
1,680,362	+				-0.9
1,680,362	+				-0.3
1,680,370	-				-0.6
1,680,465	+				-0.6
1,680,465	+				-0.2
1,680,473	-				-0.1
1,680,473	-				+0.7
1,680,473	-				+0.4
1,680,493	+				+0.4
1,680,494	+				-0.5
1,680,502	-				-0.3
1,680,502	-				-0.9
1,680,502	-				-0.5
1,680,502	-				+0.3
1,680,502	-				-0.1
1,680,502	-				+1.5
1,680,511	+				+0.8
1,680,511	+				+0.7
1,680,511	+				-0.5
1,680,519	-				-1.1
1,680,584	-				-0.4
1,680,675	+		Atu4533	0.21	+0.2
1,680,776	-		Atu4533	0.35	-0.5
1,680,860	+		Atu4533	0.46	+0.2
1,680,887	-		Atu4533	0.49	-0.6
1,680,887	-		Atu4533	0.49	+1.2
1,680,913	+		Atu4533	0.52	-0.5
1,680,921	-		Atu4533	0.54	-0.7
1,680,921	-		Atu4533	0.54	-0.8
1,680,949	-		Atu4533	0.57	+2.8
1,680,983	+		Atu4533	0.62	-1.7
1,680,991	-		Atu4533	0.63	-1.6
1,680,993	+		Atu4533	0.63	-0.3
1,681,001	-		Atu4533	0.64	-0.7
1,681,072	+		Atu4533	0.73	-0.1
1,681,118	+		Atu4533	0.79	-0.6
1,681,126	-		Atu4533	0.80	-0.6
1,681,210	+				+0.7
1,681,218	+				-1.0
1,681,229	+				-0.8
1,681,239	+				+0.4
1,681,291	+				-0.8
1,681,355	-				-0.1
1,681,396	+		Atu4534	0.11	+0.0
1,681,396	+		Atu4534	0.11	+0.8
1,681,404	-		Atu4534	0.12	+0.1
1,681,410	-		Atu4534	0.13	-0.1
1,681,437	+		Atu4534	0.16	-0.3
1,681,438	+		Atu4534	0.16	-0.4
1,681,473	+		Atu4534	0.20	-1.1
1,681,481	-		Atu4534	0.21	+1.2
1,681,481	-		Atu4534	0.21	+0.0
1,681,481	-		Atu4534	0.21	+0.1
1,681,540	+		Atu4534	0.28	-0.5
1,681,548	-		Atu4534	0.29	-0.8
1,681,565	+		Atu4534	0.31	-0.3
1,681,650	+		Atu4534	0.41	-0.4
1,681,674	+		Atu4534	0.44	-0.6
1,681,682	-		Atu4534	0.45	+1.7
1,681,765	+		Atu4534	0.55	+1.2
1,681,765	+		Atu4534	0.55	+0.2
1,681,765	+		Atu4534	0.55	-0.2
1,681,765	+		Atu4534	0.55	-0.4
1,681,773	-		Atu4534	0.56	-0.2
1,681,901	+		Atu4534	0.71	+0.1
1,681,909	-		Atu4534	0.72	-0.4
1,681,939	-		Atu4534	0.76	+0.1
1,681,946	-		Atu4534	0.77	-0.4
1,681,946	-		Atu4534	0.77	+1.2
1,681,949	+		Atu4534	0.77	-1.5
1,681,974	+		Atu4534	0.80	-0.6
1,681,982	-		Atu4534	0.81	-0.2
1,682,142	+				+0.2
1,682,183	-				-0.2
1,682,262	-		Atu4535	0.10	-0.7