Strain Fitness in Agrobacterium fabrum C58 around Atu4510

Experiment: Bethi_Library_OD0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.1
1,655,386	+				-0.3
1,655,394	-				-0.2
1,655,441	-				-0.5
1,655,548	-		Atu4509	0.11	+0.1
1,655,558	-		Atu4509	0.12	+0.5
1,655,674	+		Atu4509	0.26	+0.1
1,655,684	+		Atu4509	0.28	+1.0
1,655,710	-		Atu4509	0.31	-0.1
1,655,712	-		Atu4509	0.31	-0.4
1,655,714	+		Atu4509	0.31	-1.0
1,655,714	+		Atu4509	0.31	+0.3
1,655,714	+		Atu4509	0.31	+2.9
1,655,714	+		Atu4509	0.31	+0.3
1,655,848	+		Atu4509	0.48	+0.3
1,655,861	+		Atu4509	0.49	+1.3
1,655,965	+		Atu4509	0.62	-0.3
1,656,011	+		Atu4509	0.68	-0.9
1,656,238	-				+0.7
1,656,260	+				+0.4
1,656,268	-				+0.5
1,656,379	+				+0.3
1,656,385	+				+0.1
1,656,385	+				-0.0
1,656,395	+				+0.3
1,656,398	-				-0.2
1,656,502	+		Atu4510	0.14	-1.3
1,656,502	+		Atu4510	0.14	-0.5
1,656,569	-		Atu4510	0.22	-0.5
1,656,634	-		Atu4510	0.29	+0.7
1,656,662	+		Atu4510	0.32	+0.2
1,656,670	-		Atu4510	0.33	-0.8
1,656,671	-		Atu4510	0.33	-0.2
1,656,682	+		Atu4510	0.34	+0.2
1,656,682	+		Atu4510	0.34	+1.3
1,656,733	-		Atu4510	0.40	-1.6
1,656,846	-		Atu4510	0.52	-0.3
1,656,872	+		Atu4510	0.55	-1.1
1,656,908	-		Atu4510	0.59	-0.1
1,656,908	-		Atu4510	0.59	+0.3
1,656,908	-		Atu4510	0.59	+0.2
1,656,986	+		Atu4510	0.68	-0.7
1,656,994	-		Atu4510	0.68	-0.6
1,656,994	-		Atu4510	0.68	-0.2
1,656,994	-		Atu4510	0.68	-1.1
1,657,001	-		Atu4510	0.69	-0.9
1,657,125	-		Atu4510	0.83	-0.7
1,657,202	+				+0.7
1,657,202	+				-0.3
1,657,202	+				-0.1
1,657,207	+				-1.2
1,657,207	+				-0.6
1,657,210	-				+0.7
1,657,275	+				+0.2
1,657,321	+				-1.0
1,657,329	-				+0.2
1,657,480	+		Atu4511	0.11	-0.6
1,657,497	+		Atu4511	0.12	-0.1
1,657,561	+		Atu4511	0.15	-0.2
1,657,581	-		Atu4511	0.16	+1.8
1,657,626	-		Atu4511	0.19	-0.8
1,657,626	-		Atu4511	0.19	-0.4
1,657,638	-		Atu4511	0.19	+1.3
1,657,785	-		Atu4511	0.28	-0.0
1,657,785	-		Atu4511	0.28	+1.3
1,657,806	-		Atu4511	0.29	+0.2
1,657,911	+		Atu4511	0.34	+0.4
1,657,911	+		Atu4511	0.34	+0.3
1,657,919	-		Atu4511	0.35	-0.1
1,657,919	-		Atu4511	0.35	-1.4
1,657,919	-		Atu4511	0.35	-0.7
1,657,919	-		Atu4511	0.35	-0.6
1,658,006	+		Atu4511	0.40	+0.6
1,658,006	+		Atu4511	0.40	+1.1
1,658,030	+		Atu4511	0.41	+0.8
1,658,038	-		Atu4511	0.41	+0.9
1,658,092	-		Atu4511	0.44	+0.1
1,658,096	-		Atu4511	0.45	+0.4
1,658,119	+		Atu4511	0.46	+0.2
1,658,127	-		Atu4511	0.46	+1.1