Strain Fitness in Agrobacterium fabrum C58 around Atu1398

Experiment: Bethi_Library_OD0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.1
1,391,747	-		Atu1396	0.64	-0.5
1,391,768	+		Atu1396	0.67	+0.3
1,391,802	+		Atu1396	0.72	+0.7
1,391,807	+		Atu1396	0.73	+0.1
1,391,807	+		Atu1396	0.73	+0.4
1,391,810	-		Atu1396	0.73	-1.4
1,391,810	-		Atu1396	0.73	-0.5
1,391,909	+		Atu1396	0.87	-0.1
1,391,922	-		Atu1396	0.88	-0.1
1,391,937	+				-0.3
1,391,947	+				-0.0
1,392,096	+		Atu1397	0.17	+0.1
1,392,147	-		Atu1397	0.24	+1.0
1,392,187	+		Atu1397	0.31	+0.4
1,392,195	-		Atu1397	0.32	+0.2
1,392,316	+		Atu1397	0.50	+1.1
1,392,324	-		Atu1397	0.52	-0.2
1,392,324	-		Atu1397	0.52	+0.7
1,392,355	-		Atu1397	0.56	-1.4
1,392,373	+		Atu1397	0.59	+0.5
1,392,381	-		Atu1397	0.60	+0.8
1,392,453	+		Atu1397	0.71	+2.4
1,392,453	+		Atu1397	0.71	-2.3
1,392,473	+		Atu1397	0.74	+0.1
1,392,481	-		Atu1397	0.76	-0.3
1,392,588	-				+0.4
1,392,629	-				+0.1
1,392,707	-				-0.3
1,392,977	+		Atu1398	0.48	+0.2
1,392,980	-		Atu1398	0.48	-1.3
1,393,037	+		Atu1398	0.56	-0.4
1,393,045	-		Atu1398	0.57	-0.1
1,393,074	-		Atu1398	0.62	-0.8
1,393,156	-		Atu1398	0.73	-1.2
1,393,367	+				-0.5
1,393,367	+				+0.1
1,393,375	-				-0.4
1,393,375	-				+0.8
1,393,431	+				-0.5
1,393,455	-				+0.1
1,393,559	+		Atu1399	0.18	-0.8
1,393,559	+		Atu1399	0.18	-0.3
1,393,570	-		Atu1399	0.20	+1.1
1,393,765	+		Atu1399	0.44	+0.4
1,393,849	+		Atu1399	0.54	-0.7
1,393,860	-		Atu1399	0.56	+1.4
1,394,091	+		Atu1399	0.84	-1.0
1,394,223	+				+0.4
1,394,227	-				-1.1
1,394,240	-				-0.4
1,394,259	+				+0.2
1,394,259	+				-0.0
1,394,267	-				-0.2
1,394,323	-				-0.6
1,394,323	-				-0.4