Strain Fitness in Agrobacterium fabrum C58 around Atu2124

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
2,087,329	-				-0.4
2,087,484	+				-1.1
2,087,484	+				+0.4
2,087,491	+				-0.1
2,087,492	-				-0.9
2,087,500	+		Atu2123	0.10	-0.2
2,087,906	-		Atu2123	0.56	+0.3
2,087,906	-		Atu2123	0.56	+0.3
2,087,906	-		Atu2123	0.56	+0.1
2,087,939	+		Atu2123	0.60	+0.3
2,087,986	-		Atu2123	0.65	+1.3
2,088,070	-		Atu2123	0.74	-0.1
2,088,212	-				-0.4
2,088,293	+				+0.3
2,088,310	-				-0.9
2,088,319	-				-0.7
2,088,329	-				-0.2
2,088,388	-				-1.2
2,088,401	-				-1.0
2,088,434	-		Atu2124	0.13	+0.1
2,088,434	-		Atu2124	0.13	-2.1
2,088,603	-		Atu2124	0.30	-0.3
2,088,603	-		Atu2124	0.30	-2.2
2,088,740	-		Atu2124	0.43	-0.7
2,088,922	-		Atu2124	0.61	-1.1
2,089,007	-		Atu2124	0.69	-0.5
2,089,026	-		Atu2124	0.71	-1.3
2,089,755	-		Atu2125	0.17	+0.3
2,090,034	-		Atu2125	0.34	+0.3
2,090,153	-		Atu2125	0.41	+0.5