Experiment: Bethi_Library_OD0.05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu8082 and Atu0447 are separated by 56 nucleotides Atu0447 and Atu0448 overlap by 4 nucleotides Atu0448 and Atu0449 overlap by 1 nucleotides
Atu8082: Atu8082 - hypothetical protein, at 441,917 to 442,468
Atu8082
Atu0447: Atu0447 - hypothetical protein, at 442,525 to 443,106
Atu0447
Atu0448: Atu0448 - hypothetical protein, at 443,103 to 443,396
Atu0448
Atu0449: Atu0449 - hypothetical protein, at 443,396 to 444,616
Atu0449
Position (kb) 443
444 Strain fitness (log2 ratio) -2
-1
0
1
2 at 442.262 kb on - strand, within Atu8082 at 442.729 kb on - strand, within Atu0447 at 442.859 kb on - strand, within Atu0447 at 442.869 kb on + strand, within Atu0447 at 442.956 kb on + strand, within Atu0447 at 443.020 kb on - strand, within Atu0447 at 443.022 kb on + strand, within Atu0447 at 443.058 kb on - strand at 443.191 kb on + strand, within Atu0448 at 443.191 kb on + strand, within Atu0448 at 443.192 kb on - strand, within Atu0448 at 443.293 kb on + strand, within Atu0448 at 443.293 kb on - strand, within Atu0448 at 443.298 kb on + strand, within Atu0448 at 443.336 kb on - strand, within Atu0448 at 443.386 kb on + strand at 443.386 kb on + strand at 443.386 kb on + strand at 443.391 kb on - strand at 443.412 kb on + strand at 443.483 kb on + strand at 443.558 kb on - strand, within Atu0449 at 443.585 kb on + strand, within Atu0449 at 443.713 kb on + strand, within Atu0449 at 443.774 kb on + strand, within Atu0449 at 443.964 kb on - strand, within Atu0449 at 444.008 kb on - strand, within Atu0449 at 444.035 kb on - strand, within Atu0449 at 444.235 kb on - strand, within Atu0449 at 444.240 kb on - strand, within Atu0449 at 444.287 kb on - strand, within Atu0449 at 444.339 kb on - strand, within Atu0449 at 444.339 kb on - strand, within Atu0449 at 444.339 kb on - strand, within Atu0449 at 444.376 kb on - strand, within Atu0449 at 444.376 kb on - strand, within Atu0449 at 444.378 kb on - strand, within Atu0449 at 444.389 kb on + strand, within Atu0449
Per-strain Table
Position Strand Gene LocusTag Fraction Bethi_Library_OD0.05 remove 442,262 - Atu8082 0.62 +0.3 442,729 - Atu0447 0.35 -0.0 442,859 - Atu0447 0.57 -0.3 442,869 + Atu0447 0.59 +0.0 442,956 + Atu0447 0.74 -0.6 443,020 - Atu0447 0.85 -0.3 443,022 + Atu0447 0.85 +0.0 443,058 - +0.3 443,191 + Atu0448 0.30 -0.5 443,191 + Atu0448 0.30 -0.9 443,192 - Atu0448 0.30 -0.7 443,293 + Atu0448 0.65 -0.1 443,293 - Atu0448 0.65 -0.9 443,298 + Atu0448 0.66 -1.2 443,336 - Atu0448 0.79 +0.2 443,386 + +0.3 443,386 + +0.2 443,386 + +0.1 443,391 - -0.4 443,412 + -0.7 443,483 + +0.5 443,558 - Atu0449 0.13 -0.7 443,585 + Atu0449 0.15 -1.5 443,713 + Atu0449 0.26 +0.1 443,774 + Atu0449 0.31 -2.0 443,964 - Atu0449 0.47 +0.6 444,008 - Atu0449 0.50 +0.2 444,035 - Atu0449 0.52 +2.3 444,235 - Atu0449 0.69 -1.5 444,240 - Atu0449 0.69 +1.3 444,287 - Atu0449 0.73 -0.3 444,339 - Atu0449 0.77 -0.2 444,339 - Atu0449 0.77 +0.0 444,339 - Atu0449 0.77 +0.5 444,376 - Atu0449 0.80 -0.4 444,376 - Atu0449 0.80 -0.3 444,378 - Atu0449 0.80 +0.0 444,389 + Atu0449 0.81 +0.3
Or see this region's nucleotide sequence