Strain Fitness in Agrobacterium fabrum C58 around Atu4786

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
1,957,537	-		Atu4785	0.56	+0.4
1,957,546	+		Atu4785	0.56	+0.8
1,957,551	+		Atu4785	0.56	-1.2
1,957,648	-		Atu4785	0.61	+0.8
1,957,700	+		Atu4785	0.63	+0.7
1,957,750	+		Atu4785	0.65	-0.0
1,957,762	+		Atu4785	0.66	-0.2
1,957,770	-		Atu4785	0.66	-0.2
1,957,770	-		Atu4785	0.66	-0.2
1,957,770	-		Atu4785	0.66	+0.1
1,957,776	+		Atu4785	0.66	+0.4
1,957,803	+		Atu4785	0.68	-0.1
1,957,813	+		Atu4785	0.68	-0.5
1,957,863	-		Atu4785	0.70	-0.1
1,957,873	-		Atu4785	0.71	+0.1
1,957,882	+		Atu4785	0.71	+0.0
1,957,882	+		Atu4785	0.71	+0.0
1,957,923	-		Atu4785	0.73	+0.4
1,958,031	+		Atu4785	0.78	-0.2
1,958,119	+		Atu4785	0.82	-0.5
1,958,173	-		Atu4785	0.84	+0.1
1,958,236	+		Atu4785	0.87	-0.2
1,958,259	-		Atu4785	0.88	-0.6
1,958,539	-				+0.1
1,958,618	+				+1.8
1,958,690	+		Atu4786	0.16	+1.2
1,958,708	-		Atu4786	0.17	+1.2
1,958,776	-		Atu4786	0.24	-0.4
1,958,792	-		Atu4786	0.25	+0.2
1,958,917	+		Atu4786	0.37	-0.4
1,958,973	-		Atu4786	0.42	-0.2
1,959,050	-		Atu4786	0.50	+1.4
1,959,050	-		Atu4786	0.50	+0.4
1,959,436	+		Atu4786	0.86	+0.4
1,959,437	-		Atu4786	0.86	+0.4
1,959,544	-				+0.4
1,959,563	+				-1.3
1,959,576	-				+0.3
1,959,581	+				-0.2
1,959,605	-				-0.2
1,959,644	-				-0.5
1,959,688	-				-0.4
1,959,764	-		Atu4787	0.19	-0.6
1,959,787	-		Atu4787	0.21	+0.4
1,959,845	+		Atu4787	0.29	-0.6
1,959,847	+		Atu4787	0.29	-0.1
1,959,870	+		Atu4787	0.32	+2.7
1,960,012	+		Atu4787	0.49	+3.0
1,960,033	+		Atu4787	0.52	+0.6
1,960,041	-		Atu4787	0.53	-0.7
1,960,051	-		Atu4787	0.54	+0.6
1,960,170	+		Atu4787	0.69	+0.9
1,960,203	+		Atu4787	0.73	-0.4
1,960,278	-		Atu4787	0.82	+0.2
1,960,294	+		Atu4787	0.84	-0.1
1,960,345	+				-0.2
1,960,376	+				-0.3
1,960,384	-				-0.5
1,960,481	+				-0.2
1,960,498	-				+0.4
1,960,521	-				+0.5
1,960,532	-				-0.6
1,960,557	+				+0.3
1,960,565	-				+0.0
1,960,565	-				+0.5
1,960,565	-				+0.3
1,960,565	-				-0.0
1,960,565	-				-0.0