Strain Fitness in Agrobacterium fabrum C58 around Atu4714

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
1,876,463	-		Atu4712	0.87	-0.0
1,876,622	-				+0.0
1,876,646	+				-0.3
1,876,651	+				-1.0
1,876,659	-				+0.3
1,876,659	-				+0.0
1,876,659	-				+0.1
1,876,686	+				+0.2
1,876,789	+		Atu4713	0.18	+1.4
1,876,797	-		Atu4713	0.20	+0.2
1,876,838	+		Atu4713	0.27	+0.1
1,877,051	-		Atu4713	0.64	-2.1
1,877,068	-		Atu4713	0.67	-1.7
1,877,091	-		Atu4713	0.71	-1.1
1,877,115	+		Atu4713	0.76	-1.2
1,877,123	-		Atu4713	0.77	+0.1
1,877,139	-		Atu4713	0.80	+0.5
1,877,264	-				+0.8
1,877,264	-				-0.5
1,877,319	-				+0.3
1,877,319	-				-0.3
1,877,319	-				-0.6
1,877,319	-				+0.1
1,877,329	-				-0.2
1,877,373	+				+0.7
1,877,381	-				+0.6
1,877,403	-				-0.2
1,877,419	+		Atu4714	0.12	-0.5
1,877,447	+		Atu4714	0.18	-1.0
1,877,455	-		Atu4714	0.19	+0.5
1,877,593	-		Atu4714	0.47	+0.5
1,877,613	-		Atu4714	0.50	+0.1
1,877,681	+		Atu4714	0.64	+0.8
1,877,681	+		Atu4714	0.64	+1.2
1,877,689	-		Atu4714	0.65	+0.4
1,877,799	-		Atu4714	0.87	-0.1
1,877,815	+				+0.1
1,877,822	+				+0.6
1,877,830	-				+0.8
1,877,830	-				+0.1
1,877,873	+				-1.8
1,877,957	+		Atu8199	0.28	+0.4
1,877,978	-		Atu8199	0.34	+0.2
1,878,001	+		Atu8199	0.41	+0.8
1,878,026	+		Atu8199	0.48	-0.0
1,878,067	+		Atu8199	0.59	-0.2
1,878,082	-		Atu8199	0.64	-0.3
1,878,084	-		Atu8199	0.64	+0.1
1,878,090	+		Atu8199	0.66	-0.7
1,878,097	+		Atu8199	0.68	-0.2
1,878,097	+		Atu8199	0.68	-0.7
1,878,105	-		Atu8199	0.70	-0.2
1,878,119	+		Atu8199	0.74	+0.6
1,878,205	-				+0.3
1,878,308	-		Atu8096	0.52	-0.6
1,878,418	-				-0.4
1,878,472	+				-0.5
1,878,494	-				+0.0
1,878,500	+				-1.6
1,878,579	-				+1.2
1,878,684	+		Atu4716	0.10	+0.4
1,878,704	+		Atu4716	0.11	-0.2
1,878,724	-		Atu4716	0.13	-0.1
1,878,730	+		Atu4716	0.13	-0.1
1,878,763	-		Atu4716	0.15	+0.3
1,878,823	-		Atu4716	0.20	-1.0