Strain Fitness in Agrobacterium fabrum C58 around Atu4690

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
1,847,201	-		Atu4688	0.64	-0.2
1,847,236	+		Atu4688	0.69	-0.4
1,847,338	+		Atu4688	0.83	-0.3
1,847,346	-		Atu4688	0.84	+1.1
1,847,351	-		Atu4688	0.85	+0.1
1,847,363	-		Atu4688	0.87	-0.5
1,847,373	+		Atu4688	0.88	-0.2
1,847,373	+		Atu4688	0.88	-0.4
1,847,430	-				-0.1
1,847,493	+				-0.3
1,847,498	-				+0.6
1,847,505	+				+0.1
1,847,505	+				+1.4
1,847,511	+				+2.0
1,847,513	-				-0.1
1,847,513	-				-0.3
1,847,574	+		Atu4689	0.18	-0.3
1,847,626	-		Atu4689	0.26	+0.4
1,847,664	-		Atu4689	0.32	+1.2
1,847,672	+		Atu4689	0.33	+0.4
1,847,684	+		Atu4689	0.35	+0.1
1,847,736	+		Atu4689	0.43	-0.2
1,847,788	+		Atu4689	0.51	+0.0
1,847,802	-		Atu4689	0.53	-0.6
1,847,829	+		Atu4689	0.57	+0.5
1,847,876	+		Atu4689	0.64	+0.4
1,847,922	+		Atu4689	0.71	+0.3
1,847,961	+		Atu4689	0.77	-0.1
1,847,969	-		Atu4689	0.78	+0.9
1,847,985	-		Atu4689	0.81	+0.2
1,848,063	+				-1.2
1,848,121	+				+0.8
1,848,145	+				+0.1
1,848,153	-				+0.3
1,848,153	-				+0.3
1,848,202	+				+0.1
1,848,243	+		Atu4690	0.13	+0.9
1,848,256	-		Atu4690	0.15	-0.1
1,848,282	+		Atu4690	0.19	+0.6
1,848,396	-		Atu4690	0.36	+0.3
1,848,396	-		Atu4690	0.36	-0.2
1,848,448	-		Atu4690	0.44	+0.4
1,848,495	+		Atu4690	0.51	-0.1
1,848,533	+		Atu4690	0.57	-0.6
1,848,572	-		Atu4690	0.62	+0.4
1,848,600	+		Atu4690	0.67	+0.0
1,848,620	+		Atu4690	0.70	+0.9
1,848,660	+		Atu4690	0.75	+0.9
1,848,708	-		Atu4690	0.83	+0.0
1,848,791	-				+0.5
1,848,867	+				-0.4
1,848,909	+				-1.2
1,848,917	-				-1.1
1,848,917	-				-0.2
1,848,925	-				-0.4
1,848,938	-				-1.0
1,848,938	-				-0.4
1,849,130	+		Atu4691	0.30	+0.0
1,849,172	+		Atu4691	0.35	-0.1
1,849,205	-		Atu4691	0.38	+0.2
1,849,265	-		Atu4691	0.45	+0.1
1,849,317	-		Atu4691	0.50	+0.2
1,849,337	+		Atu4691	0.52	-0.5
1,849,361	+		Atu4691	0.55	-0.6
1,849,403	+		Atu4691	0.59	-0.0
1,849,432	+		Atu4691	0.62	-0.1
1,849,516	+		Atu4691	0.71	+0.1
1,849,617	+		Atu4691	0.82	+0.4
1,849,634	-		Atu4691	0.84	-0.1
1,849,650	-		Atu4691	0.86	+0.5
1,849,701	-				-0.2
1,849,717	+				-0.8
1,849,800	-				-0.1
1,849,808	-				+0.2
1,849,819	+				+1.9