Strain Fitness in Agrobacterium fabrum C58 around Atu4681

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
1,838,169	-		Atu4679	0.56	-0.0
1,838,260	+		Atu4679	0.70	+0.8
1,838,270	+		Atu4679	0.72	+2.4
1,838,279	+		Atu4679	0.73	+0.1
1,838,358	+		Atu4679	0.85	+0.0
1,838,463	+				-1.8
1,838,481	-				-0.1
1,838,488	+				-0.8
1,838,488	+				+0.0
1,838,496	-				-0.3
1,838,520	-				-0.2
1,838,613	-		Atu4680	0.22	-0.0
1,838,634	+		Atu4680	0.25	-0.1
1,838,686	+		Atu4680	0.33	+0.0
1,838,694	+		Atu4680	0.34	+0.4
1,838,853	+		Atu4680	0.58	+0.0
1,838,874	-		Atu4680	0.62	+0.7
1,838,916	-		Atu4680	0.68	+0.3
1,838,941	-		Atu4680	0.72	+1.0
1,838,998	-		Atu4680	0.81	+0.4
1,838,998	-		Atu4680	0.81	-1.0
1,839,028	-		Atu4680	0.85	+2.9
1,839,178	+				+1.0
1,839,178	+				-0.6
1,839,178	+				+0.1
1,839,181	-				-0.3
1,839,262	+		Atu4681	0.20	+0.8
1,839,262	+		Atu4681	0.20	-0.4
1,839,363	-		Atu4681	0.34	+0.6
1,839,429	+		Atu4681	0.43	+0.6
1,839,511	-		Atu4681	0.54	-0.5
1,839,517	-		Atu4681	0.55	+0.6
1,839,553	-		Atu4681	0.60	+0.5
1,839,607	+		Atu4681	0.68	-0.1
1,839,615	-		Atu4681	0.69	-1.4
1,839,728	-		Atu4681	0.85	+0.9
1,839,772	+				-0.3
1,840,126	+		Atu4682	0.23	+0.4
1,840,160	+		Atu4682	0.26	+0.6
1,840,161	-		Atu4682	0.26	+0.2
1,840,161	-		Atu4682	0.26	+0.1
1,840,186	+		Atu4682	0.28	+0.3
1,840,256	+		Atu4682	0.34	+0.0
1,840,327	-		Atu4682	0.39	+1.4
1,840,340	+		Atu4682	0.40	-0.4
1,840,352	+		Atu4682	0.41	-0.2
1,840,449	+		Atu4682	0.49	+0.4
1,840,449	-		Atu4682	0.49	-0.5
1,840,453	+		Atu4682	0.49	-0.6
1,840,457	-		Atu4682	0.50	-0.1
1,840,505	-		Atu4682	0.54	-0.2
1,840,509	-		Atu4682	0.54	-0.4
1,840,549	-		Atu4682	0.57	+0.2
1,840,673	-		Atu4682	0.67	+0.8
1,840,686	+		Atu4682	0.68	-0.3
1,840,694	-		Atu4682	0.69	+0.0
1,840,749	-		Atu4682	0.73	+0.6