Strain Fitness in Agrobacterium fabrum C58 around Atu4179

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
1,303,620	-				-0.4
1,303,684	-				-0.5
1,303,691	-				+0.7
1,303,700	+				-0.2
1,303,706	-				+0.1
1,303,708	-				+0.2
1,303,708	-				-1.0
1,303,727	+				+1.1
1,303,735	-				+0.1
1,303,774	-				-0.6
1,303,787	+				-0.2
1,303,787	+				-0.9
1,303,787	+				-0.7
1,303,795	-				-0.1
1,303,807	+		Atu4179	0.12	-0.1
1,303,807	+		Atu4179	0.12	+0.8
1,303,815	-		Atu4179	0.14	+0.9
1,303,938	+		Atu4179	0.41	-0.9
1,303,938	+		Atu4179	0.41	+0.6
1,303,938	+		Atu4179	0.41	-0.4
1,303,993	+		Atu4179	0.53	+0.5
1,304,090	+		Atu4179	0.75	-0.6
1,304,090	+		Atu4179	0.75	+0.2