Strain Fitness in Agrobacterium fabrum C58 around Atu2056

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
2,018,248	-		Atu2055	0.34	+0.1
2,018,521	+		Atu2055	0.58	-0.1
2,018,529	-		Atu2055	0.58	+1.0
2,018,574	+		Atu2055	0.62	-0.3
2,018,606	+		Atu2055	0.65	-0.2
2,018,620	+		Atu2055	0.66	+1.2
2,018,636	+		Atu2055	0.68	-0.3
2,018,949	+				-0.9
2,018,973	+				+0.1
2,018,997	-				+0.3
2,019,040	-				-0.5
2,019,040	-				+0.1
2,019,040	-				-1.0
2,019,040	-				-0.3
2,019,087	+				-0.2
2,019,184	+				-1.3
2,019,383	-		Atu2056	0.37	+0.4
2,019,429	+		Atu2056	0.48	-0.3
2,019,439	+		Atu2056	0.50	+0.3
2,019,446	+		Atu2056	0.52	+0.2
2,019,472	-		Atu2056	0.58	+0.4
2,019,489	+		Atu2056	0.63	+1.2
2,019,572	+		Atu2056	0.83	+0.5
2,019,709	-				-1.9
2,019,741	-				+1.2
2,019,866	-				+0.2
2,019,879	+				-0.8
2,020,143	+		Atu2057	0.16	+0.2
2,020,151	-		Atu2057	0.16	+0.7