Strain Fitness in Agrobacterium fabrum C58 around Atu1795
Experiment: Bethi_Library_OD0.05
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Bethi_Library_OD0.05 |
|---|---|---|---|---|---|
| remove | |||||
| 1,782,271 | + | +0.3 | |||
| 1,782,368 | + | +0.0 | |||
| 1,782,458 | - | Atu1795 | 0.16 | +0.4 | |
| 1,782,748 | - | Atu1795 | 0.47 | +0.6 | |
| 1,782,915 | - | Atu1795 | 0.65 | -0.0 | |
| 1,782,962 | + | Atu1795 | 0.70 | +0.7 | |
| 1,782,967 | + | Atu1795 | 0.70 | -1.0 | |
| 1,783,041 | - | Atu1795 | 0.78 | +0.3 | |
| 1,783,176 | - | +0.0 | |||
| 1,783,273 | - | -0.4 | |||
| 1,783,310 | - | -0.1 | |||
| 1,784,153 | - | +0.3 |
Or see this region's nucleotide sequence