Strain Fitness in Agrobacterium fabrum C58 around Atu0136

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
138,475	+				+0.4
138,482	+				+1.4
138,482	+				+0.1
138,482	+				-0.2
138,482	+				-0.3
138,482	+				+0.3
138,482	+				+0.0
138,483	-				+0.2
138,490	-				-0.4
138,490	-				-0.8
138,490	-				+0.4
138,490	-				-0.6
138,490	-				-0.3
138,490	-				+0.3
138,580	-				-0.2
138,983	-		Atu0135	0.62	-0.3
139,089	+		Atu0135	0.79	+1.4
139,306	+				-0.2
139,335	+				-0.2
139,426	-		Atu0136	0.11	+0.4
139,452	-		Atu0136	0.14	+0.3
139,518	-		Atu0136	0.20	+1.5
139,618	+		Atu0136	0.31	+0.3
139,626	-		Atu0136	0.31	-0.5
139,639	+		Atu0136	0.33	-0.2
139,727	+		Atu0136	0.42	+0.4
139,837	+		Atu0136	0.53	+1.7
139,985	-		Atu0136	0.68	+0.3
140,114	-		Atu0136	0.81	-0.0
140,130	+		Atu0136	0.83	-0.3
140,250	-				-0.4
140,335	-				+0.3
140,445	-		Atu0137	0.12	-1.4
140,476	-		Atu0137	0.15	-0.1
140,513	-		Atu0137	0.18	+0.8
140,574	+		Atu0137	0.23	+0.4
140,661	-		Atu0137	0.30	-0.1
140,749	+		Atu0137	0.37	-1.2
140,749	+		Atu0137	0.37	-0.0
140,821	-		Atu0137	0.43	+1.8
140,888	-		Atu0137	0.49	-0.5
140,921	+		Atu0137	0.51	+0.4
141,030	+		Atu0137	0.60	-0.6
141,116	+		Atu0137	0.67	+0.2
141,124	-		Atu0137	0.68	-0.3