Strain Fitness in Agrobacterium fabrum C58 around Atu3109

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
117,696	-		Atu3108	0.47	-1.2
117,709	+		Atu3108	0.48	-2.4
117,722	+		Atu3108	0.48	-0.2
117,730	-		Atu3108	0.49	-0.3
117,765	-		Atu3108	0.51	-0.7
117,772	-		Atu3108	0.51	-0.3
117,786	-		Atu3108	0.52	+1.0
117,794	-		Atu3108	0.52	+0.1
117,837	+		Atu3108	0.55	-1.9
117,877	+		Atu3108	0.57	-0.4
117,925	-		Atu3108	0.59	-0.7
117,956	+		Atu3108	0.61	+0.7
118,043	+		Atu3108	0.65	+0.3
118,121	+		Atu3108	0.70	+1.3
118,129	-		Atu3108	0.70	-0.9
118,147	+		Atu3108	0.71	-1.2
118,155	-		Atu3108	0.71	-0.5
118,168	-		Atu3108	0.72	+0.0
118,170	+		Atu3108	0.72	-2.5
118,191	+		Atu3108	0.73	-0.3
118,221	+		Atu3108	0.75	+3.1
118,229	-		Atu3108	0.75	-0.5
118,290	-		Atu3108	0.79	+0.2
118,293	-		Atu3108	0.79	+0.3
118,441	-		Atu3108	0.87	+0.1
118,476	-		Atu3108	0.88	+0.1
118,556	-				-0.4
118,582	-				-0.1
118,620	+				+1.3
118,621	+				+0.6
118,765	+				-0.8
118,784	+				+1.7
118,784	+				+0.3
118,878	+		Atu3109	0.18	-1.8
118,883	+		Atu3109	0.19	-0.8
118,883	+		Atu3109	0.19	+0.2
118,886	-		Atu3109	0.19	-0.5
118,890	+		Atu3109	0.20	-0.4
118,891	-		Atu3109	0.20	-1.0
118,891	-		Atu3109	0.20	-0.7
118,989	+		Atu3109	0.29	-0.4
118,991	+		Atu3109	0.30	+0.7
119,004	-		Atu3109	0.31	-0.1
119,004	-		Atu3109	0.31	-0.9
119,009	-		Atu3109	0.31	-0.1
119,118	+		Atu3109	0.42	-0.4
119,126	-		Atu3109	0.43	+0.2
119,291	-		Atu3109	0.59	-1.4
119,366	-		Atu3109	0.66	+0.1
119,424	-		Atu3109	0.72	+2.9
119,429	-		Atu3109	0.73	-0.5
119,601	-		Atu3109	0.90	+0.0
119,673	+				+2.3
119,904	-		Atu3110	0.25	-0.5
119,937	+		Atu3110	0.30	-0.7
120,003	-		Atu3110	0.38	+0.3
120,029	+		Atu3110	0.41	-0.5
120,144	-		Atu3110	0.56	-1.3
120,154	-		Atu3110	0.57	+1.3
120,178	-		Atu3110	0.60	+0.1
120,178	-		Atu3110	0.60	+0.7
120,182	+		Atu3110	0.61	-0.0
120,189	-		Atu3110	0.62	-0.6
120,359	-		Atu3110	0.83	+0.1
120,377	+		Atu3110	0.85	-0.8
120,394	-		Atu3110	0.88	-1.7
120,506	-				+1.1
120,523	+				-0.3
120,528	+				-0.4
120,541	-				+0.6
120,655	-				-0.4
120,667	+				+0.5
120,685	+				-0.7
120,698	-				-0.4