Experiment: Bethi_Library_OD0.05
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0838 and Atu0839 are separated by 310 nucleotides Atu0839 and Atu0840 are separated by 1 nucleotides
Atu0838: Atu0838 - MFS permease, at 836,902 to 838,425
Atu0838
Atu0839: Atu0839 - hypothetical protein, at 838,736 to 839,731
Atu0839
Atu0840: Atu0840 - ATP-dependent DNA ligase, at 839,733 to 841,358
Atu0840
Position (kb) 838
839
840 Strain fitness (log2 ratio) -2
-1
0
1
2 at 837.826 kb on - strand, within Atu0838 at 837.839 kb on - strand, within Atu0838 at 837.906 kb on + strand, within Atu0838 at 837.906 kb on + strand, within Atu0838 at 837.960 kb on - strand, within Atu0838 at 838.020 kb on + strand, within Atu0838 at 838.028 kb on - strand, within Atu0838 at 838.063 kb on + strand, within Atu0838 at 838.069 kb on - strand, within Atu0838 at 838.073 kb on - strand, within Atu0838 at 838.254 kb on + strand, within Atu0838 at 838.262 kb on - strand, within Atu0838 at 838.279 kb on + strand at 838.444 kb on + strand at 838.463 kb on - strand at 838.594 kb on + strand at 838.594 kb on + strand at 838.712 kb on - strand at 838.827 kb on - strand at 838.843 kb on + strand, within Atu0839 at 838.944 kb on + strand, within Atu0839 at 838.952 kb on - strand, within Atu0839 at 838.956 kb on + strand, within Atu0839 at 838.956 kb on - strand, within Atu0839 at 838.997 kb on + strand, within Atu0839 at 839.000 kb on - strand, within Atu0839 at 839.011 kb on - strand, within Atu0839 at 839.090 kb on + strand, within Atu0839 at 839.098 kb on + strand, within Atu0839 at 839.098 kb on + strand, within Atu0839 at 839.106 kb on - strand, within Atu0839 at 839.106 kb on - strand, within Atu0839 at 839.139 kb on + strand, within Atu0839 at 839.192 kb on + strand, within Atu0839 at 839.202 kb on + strand, within Atu0839 at 839.212 kb on - strand, within Atu0839 at 839.238 kb on + strand, within Atu0839 at 839.382 kb on - strand, within Atu0839 at 839.421 kb on - strand, within Atu0839 at 839.421 kb on - strand, within Atu0839 at 839.508 kb on + strand, within Atu0839 at 839.557 kb on + strand, within Atu0839 at 839.562 kb on + strand, within Atu0839 at 839.672 kb on - strand at 839.728 kb on - strand at 839.740 kb on - strand at 839.740 kb on - strand at 839.761 kb on + strand at 839.814 kb on - strand at 839.884 kb on + strand at 839.892 kb on - strand at 839.928 kb on + strand, within Atu0840 at 839.929 kb on - strand, within Atu0840 at 839.934 kb on + strand, within Atu0840 at 839.975 kb on - strand, within Atu0840 at 840.034 kb on - strand, within Atu0840 at 840.076 kb on + strand, within Atu0840 at 840.087 kb on - strand, within Atu0840 at 840.128 kb on - strand, within Atu0840 at 840.258 kb on + strand, within Atu0840 at 840.269 kb on + strand, within Atu0840 at 840.269 kb on + strand, within Atu0840 at 840.269 kb on + strand, within Atu0840 at 840.269 kb on + strand, within Atu0840 at 840.269 kb on + strand, within Atu0840 at 840.269 kb on + strand, within Atu0840 at 840.269 kb on + strand, within Atu0840 at 840.269 kb on + strand, within Atu0840 at 840.269 kb on + strand, within Atu0840 at 840.277 kb on - strand, within Atu0840 at 840.277 kb on - strand, within Atu0840 at 840.404 kb on + strand, within Atu0840 at 840.409 kb on - strand, within Atu0840 at 840.526 kb on - strand, within Atu0840 at 840.690 kb on - strand, within Atu0840 at 840.725 kb on + strand, within Atu0840 at 840.730 kb on + strand, within Atu0840
Per-strain Table
Position Strand Gene LocusTag Fraction Bethi_Library_OD0.05 remove 837,826 - Atu0838 0.61 -0.0 837,839 - Atu0838 0.61 +0.2 837,906 + Atu0838 0.66 +0.6 837,906 + Atu0838 0.66 +1.4 837,960 - Atu0838 0.69 -0.2 838,020 + Atu0838 0.73 -0.9 838,028 - Atu0838 0.74 +0.5 838,063 + Atu0838 0.76 -1.8 838,069 - Atu0838 0.77 -0.1 838,073 - Atu0838 0.77 +0.1 838,254 + Atu0838 0.89 -0.1 838,262 - Atu0838 0.89 -1.8 838,279 + -0.3 838,444 + -0.3 838,463 - +0.6 838,594 + +0.4 838,594 + -0.4 838,712 - -0.2 838,827 - +0.9 838,843 + Atu0839 0.11 -0.1 838,944 + Atu0839 0.21 +0.2 838,952 - Atu0839 0.22 +0.7 838,956 + Atu0839 0.22 +0.8 838,956 - Atu0839 0.22 -0.6 838,997 + Atu0839 0.26 -1.1 839,000 - Atu0839 0.27 +0.3 839,011 - Atu0839 0.28 +0.0 839,090 + Atu0839 0.36 +1.4 839,098 + Atu0839 0.36 +0.3 839,098 + Atu0839 0.36 -0.4 839,106 - Atu0839 0.37 +0.2 839,106 - Atu0839 0.37 +0.3 839,139 + Atu0839 0.40 -0.4 839,192 + Atu0839 0.46 -0.0 839,202 + Atu0839 0.47 +1.4 839,212 - Atu0839 0.48 +0.6 839,238 + Atu0839 0.50 +1.2 839,382 - Atu0839 0.65 +0.5 839,421 - Atu0839 0.69 -0.2 839,421 - Atu0839 0.69 -1.0 839,508 + Atu0839 0.78 +0.4 839,557 + Atu0839 0.82 +1.0 839,562 + Atu0839 0.83 +2.4 839,672 - -0.6 839,728 - -1.0 839,740 - -0.4 839,740 - +0.4 839,761 + +0.1 839,814 - +0.3 839,884 + -0.7 839,892 - -0.6 839,928 + Atu0840 0.12 +0.4 839,929 - Atu0840 0.12 -1.2 839,934 + Atu0840 0.12 +0.1 839,975 - Atu0840 0.15 +0.2 840,034 - Atu0840 0.19 -0.2 840,076 + Atu0840 0.21 +0.8 840,087 - Atu0840 0.22 +0.7 840,128 - Atu0840 0.24 -0.0 840,258 + Atu0840 0.32 -0.1 840,269 + Atu0840 0.33 -0.2 840,269 + Atu0840 0.33 -0.5 840,269 + Atu0840 0.33 -0.1 840,269 + Atu0840 0.33 -1.6 840,269 + Atu0840 0.33 -0.5 840,269 + Atu0840 0.33 -0.2 840,269 + Atu0840 0.33 -0.4 840,269 + Atu0840 0.33 +0.6 840,269 + Atu0840 0.33 -1.1 840,277 - Atu0840 0.33 -0.1 840,277 - Atu0840 0.33 +0.1 840,404 + Atu0840 0.41 +1.0 840,409 - Atu0840 0.42 -1.0 840,526 - Atu0840 0.49 +0.0 840,690 - Atu0840 0.59 -0.1 840,725 + Atu0840 0.61 -1.2 840,730 + Atu0840 0.61 -0.6
Or see this region's nucleotide sequence