Strain Fitness in Agrobacterium fabrum C58 around Atu2041

Experiment: Bethi_Library_OD0.05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.05
1,999,227	-		Atu2040	0.15	-0.5
1,999,418	+		Atu2040	0.37	-3.0
1,999,427	-		Atu2040	0.38	-1.1
1,999,493	+		Atu2040	0.45	-1.3
1,999,493	+		Atu2040	0.45	-1.7
1,999,493	+		Atu2040	0.45	-1.9
1,999,501	-		Atu2040	0.46	-0.5
1,999,501	-		Atu2040	0.46	-2.8
1,999,844	+		Atu2040	0.84	+0.5
1,999,863	-		Atu2040	0.87	-1.8
1,999,899	+				-1.8
1,999,923	-				-2.0
2,000,016	+				+0.5
2,000,031	+				-0.2
2,000,211	-		Atu2041	0.41	-0.8
2,000,466	-		Atu2041	0.86	-1.3
2,000,743	+		Atu2042	0.23	+0.6
2,000,744	+		Atu2042	0.23	-0.1
2,000,817	-		Atu2042	0.33	+0.0
2,000,831	-		Atu2042	0.35	+0.4
2,000,885	-		Atu2042	0.42	+0.3
2,000,999	-		Atu2042	0.57	+0.2
2,001,149	-		Atu2042	0.77	-2.2
2,001,191	-		Atu2042	0.83	+0.2
2,001,269	-				-0.1
2,001,349	-				+1.1
2,001,514	-				+1.2