Strain Fitness in Agrobacterium fabrum C58 around Atu3100

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
106,393	+		Atu3099	0.18	-1.1
106,401	+		Atu3099	0.18	+1.5
106,409	-		Atu3099	0.19	+0.4
106,427	+		Atu3099	0.21	+0.0
106,580	-		Atu3099	0.34	+0.9
106,622	+		Atu3099	0.38	+0.3
106,630	-		Atu3099	0.39	+0.1
106,678	+		Atu3099	0.43	+0.8
106,678	+		Atu3099	0.43	+0.4
106,689	+		Atu3099	0.44	+0.1
106,817	+		Atu3099	0.55	+0.6
106,822	+		Atu3099	0.56	-0.2
106,830	-		Atu3099	0.57	-0.0
106,879	-		Atu3099	0.61	-1.4
106,952	-		Atu3099	0.67	+0.5
106,981	-		Atu3099	0.70	+0.0
107,034	+		Atu3099	0.75	-1.5
107,055	+		Atu3099	0.77	+1.8
107,125	+		Atu3099	0.83	+0.9
107,165	+		Atu3099	0.86	-0.6
107,207	-				-1.6
107,312	+				+0.4
107,337	-				+2.5
107,383	-				-0.5
107,394	-				-0.1
107,404	-				+0.1
107,446	+				-1.2
107,539	+		Atu3100	0.18	-0.4
107,600	+		Atu3100	0.25	+0.4
107,659	-		Atu3100	0.32	-0.1
107,780	-		Atu3100	0.47	-0.1
107,817	+		Atu3100	0.52	-0.6
107,859	-		Atu3100	0.57	+1.5
107,859	-		Atu3100	0.57	-0.3
107,874	+		Atu3100	0.58	+0.3
107,935	+		Atu3100	0.66	+0.3
108,089	+		Atu3100	0.84	+1.5
108,129	+		Atu3100	0.89	-1.1
108,129	+		Atu3100	0.89	-0.5
108,137	-				+0.5
108,147	+				+0.7
108,187	-				-0.7
108,215	+				+2.5
108,220	-				+0.2
108,232	-				+0.9
108,381	-		Atu3101	0.19	+0.6
108,392	+		Atu3101	0.20	+0.5
108,400	-		Atu3101	0.21	+0.2
108,445	-		Atu3101	0.26	-0.4
108,458	+		Atu3101	0.28	+0.5
108,501	+		Atu3101	0.33	-0.1
108,576	+		Atu3101	0.41	-0.1
108,576	+		Atu3101	0.41	-0.1
108,584	-		Atu3101	0.42	+0.1
108,584	-		Atu3101	0.42	-0.7
108,735	+		Atu3101	0.59	+0.9
108,750	+		Atu3101	0.61	-0.1
108,774	-		Atu3101	0.64	+0.0
108,789	+		Atu3101	0.65	+0.4
108,792	-		Atu3101	0.66	+0.1
108,893	+		Atu3101	0.77	-0.6
108,937	+		Atu3101	0.82	-0.5
108,958	+		Atu3101	0.85	-0.2
108,966	-		Atu3101	0.86	-1.3
108,966	-		Atu3101	0.86	+0.5
109,046	+				-0.1
109,094	+				-1.5
109,094	+				+0.7
109,106	+				-0.1
109,121	-				-0.4
109,143	-				+0.0
109,180	+				-0.2
109,193	+				-0.6
109,209	-				-0.1