Strain Fitness in Agrobacterium fabrum C58 around Atu2181

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
2,156,409	-		Atu2180	0.35	-0.6
2,156,441	-		Atu2180	0.38	-0.3
2,156,564	+		Atu2180	0.46	-1.0
2,156,590	+		Atu2180	0.48	+0.4
2,156,614	-		Atu2180	0.50	-0.1
2,156,773	+		Atu2180	0.61	+0.2
2,156,779	-		Atu2180	0.61	+0.1
2,156,791	+		Atu2180	0.62	+0.1
2,156,791	+		Atu2180	0.62	+0.6
2,156,791	-		Atu2180	0.62	-0.2
2,156,825	-		Atu2180	0.64	-0.7
2,157,001	-		Atu2180	0.76	+0.4
2,157,126	-		Atu2180	0.85	-2.0
2,157,133	-		Atu2180	0.85	+0.1
2,157,146	-		Atu2180	0.86	-0.0
2,157,177	-		Atu2180	0.89	+0.1
2,157,282	+				-1.2
2,157,348	-				+0.2
2,157,348	-				-0.1
2,157,389	+				-0.2
2,157,441	+				-1.2
2,157,449	-				-0.3
2,157,449	-				+0.1
2,157,497	+		Atu2181	0.13	-1.3
2,157,582	+		Atu2181	0.19	+2.0
2,157,632	-		Atu2181	0.24	+1.5
2,157,654	-		Atu2181	0.25	+3.1
2,157,714	-		Atu2181	0.30	-0.3
2,157,824	+		Atu2181	0.39	-0.1
2,157,852	+		Atu2181	0.41	+0.3
2,157,920	+		Atu2181	0.47	-0.5
2,158,056	+		Atu2181	0.58	-0.8
2,158,087	+		Atu2181	0.60	-1.0
2,158,087	+		Atu2181	0.60	+1.0
2,158,102	+		Atu2181	0.62	-0.3
2,158,256	+		Atu2181	0.74	-0.0
2,158,271	+		Atu2181	0.75	-0.9
2,158,277	+		Atu2181	0.76	+0.4
2,158,314	-		Atu2181	0.79	-0.3
2,158,314	-		Atu2181	0.79	-0.8
2,158,421	+		Atu2181	0.88	-0.3
2,158,448	+		Atu2181	0.90	-2.0
2,158,448	+		Atu2181	0.90	-0.2
2,158,456	-				-0.2
2,158,467	+				+0.6
2,158,485	+				+0.6
2,158,487	+				-0.3
2,158,516	+				+0.4
2,158,550	+				+1.0
2,158,550	+				-0.3
2,158,558	-				-0.7
2,158,688	+				-0.0
2,158,720	+				-0.8
2,158,728	-				-1.5
2,159,266	-				+0.2
2,159,382	-				-0.5
2,159,431	-				-0.0
2,159,432	+				-1.4
2,159,473	-		Atu2183	0.11	-2.4
2,159,481	-		Atu2183	0.12	-0.0