Strain Fitness in Agrobacterium fabrum C58 around Atu1415

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
1,409,855	-		Atu1414	0.43	-0.0
1,409,879	+		Atu1414	0.45	+0.3
1,409,911	-		Atu1414	0.47	-0.1
1,409,936	+		Atu1414	0.49	-0.2
1,409,963	+		Atu1414	0.50	-0.3
1,409,979	-		Atu1414	0.51	+0.0
1,410,022	+		Atu1414	0.54	-0.7
1,410,134	-		Atu1414	0.61	+0.6
1,410,139	+		Atu1414	0.62	-0.6
1,410,261	+		Atu1414	0.69	-0.7
1,410,414	-		Atu1414	0.79	+0.0
1,410,424	-		Atu1414	0.80	-0.5
1,410,503	-		Atu1414	0.85	+1.3
1,410,519	-		Atu1414	0.86	-0.4
1,410,613	-				+0.5
1,410,658	+				+0.6
1,410,795	+				-1.0
1,410,824	+				-0.6
1,410,827	-				+0.2
1,410,891	+		Atu1415	0.15	+1.6
1,410,917	+		Atu1415	0.19	+0.1
1,410,917	+		Atu1415	0.19	-1.4
1,410,925	-		Atu1415	0.20	+0.2
1,411,000	-		Atu1415	0.29	+1.0
1,411,125	-		Atu1415	0.45	+1.0
1,411,136	+		Atu1415	0.47	-0.4
1,411,143	+		Atu1415	0.48	+0.2
1,411,144	-		Atu1415	0.48	+0.9
1,411,512	+				+0.6
1,411,512	+				+0.1
1,411,527	-				+0.1
1,411,558	-				+0.3
1,411,568	+				+0.2
1,411,573	+				+0.2
1,411,807	+		Atu1416	0.14	+0.2
1,411,927	+		Atu1416	0.21	-0.0
1,411,952	+		Atu1416	0.22	+2.6
1,411,998	-		Atu1416	0.25	+0.8
1,412,159	-		Atu1416	0.34	+0.2
1,412,251	-		Atu1416	0.39	+1.4
1,412,291	+		Atu1416	0.41	-0.4
1,412,293	+		Atu1416	0.41	+1.4
1,412,340	+		Atu1416	0.43	+0.0
1,412,342	+		Atu1416	0.44	+0.6
1,412,348	-		Atu1416	0.44	+1.3
1,412,348	-		Atu1416	0.44	-0.5
1,412,358	-		Atu1416	0.44	-0.0
1,412,358	-		Atu1416	0.44	+0.2
1,412,372	+		Atu1416	0.45	+1.0
1,412,508	+		Atu1416	0.53	+0.9
1,412,511	-		Atu1416	0.53	+1.2