Strain Fitness in Agrobacterium fabrum C58 around Atu4723

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
1,885,384	-		Atu4722	0.47	-0.2
1,885,384	-		Atu4722	0.47	+0.6
1,885,388	+		Atu4722	0.47	+1.0
1,885,435	+		Atu4722	0.50	+0.2
1,885,454	+		Atu4722	0.51	+0.0
1,885,462	-		Atu4722	0.52	+0.2
1,885,462	-		Atu4722	0.52	-0.2
1,885,468	-		Atu4722	0.52	-0.4
1,885,515	+		Atu4722	0.55	+0.1
1,885,572	+		Atu4722	0.58	-0.3
1,885,608	+		Atu4722	0.60	+1.6
1,885,621	-		Atu4722	0.61	+0.7
1,885,621	-		Atu4722	0.61	+1.0
1,885,669	-		Atu4722	0.63	-1.4
1,885,679	-		Atu4722	0.64	-0.3
1,885,788	+		Atu4722	0.70	+1.3
1,885,796	-		Atu4722	0.70	+0.2
1,885,808	-		Atu4722	0.71	+1.1
1,885,840	+		Atu4722	0.73	-0.2
1,885,848	-		Atu4722	0.73	+0.0
1,885,946	+		Atu4722	0.79	+0.5
1,885,946	+		Atu4722	0.79	-0.5
1,885,946	+		Atu4722	0.79	+0.6
1,885,951	+		Atu4722	0.79	-0.5
1,885,956	+		Atu4722	0.79	-1.6
1,885,970	+		Atu4722	0.80	-1.8
1,885,986	-		Atu4722	0.81	+0.6
1,886,080	+		Atu4722	0.86	+1.0
1,886,085	+		Atu4722	0.86	+0.3
1,886,085	+		Atu4722	0.86	-0.2
1,886,093	-		Atu4722	0.87	-0.6
1,886,098	+		Atu4722	0.87	-0.7
1,886,149	+				+2.8
1,886,177	+				-2.7
1,886,343	-				-0.0
1,886,540	+		Atu4723	0.12	+1.5
1,886,548	-		Atu4723	0.12	-0.4
1,886,561	+		Atu4723	0.13	+0.3
1,886,627	-		Atu4723	0.16	+0.0
1,886,681	+		Atu4723	0.19	+1.0
1,886,757	-		Atu4723	0.24	-0.6
1,887,043	-		Atu4723	0.39	+0.4
1,887,189	+		Atu4723	0.47	-0.1
1,887,290	+		Atu4723	0.53	+0.0
1,887,299	+		Atu4723	0.53	+0.9
1,887,312	-		Atu4723	0.54	+0.9
1,887,332	+		Atu4723	0.55	+0.4
1,887,474	+		Atu4723	0.63	+1.0
1,887,493	+		Atu4723	0.64	+0.5
1,887,586	+		Atu4723	0.69	-0.0
1,887,600	+		Atu4723	0.70	+0.5
1,887,624	-		Atu4723	0.71	-0.3
1,887,738	+		Atu4723	0.78	+0.0
1,887,738	+		Atu4723	0.78	+1.0
1,887,745	+		Atu4723	0.78	+2.3
1,887,746	-		Atu4723	0.78	-0.4
1,887,765	+		Atu4723	0.79	+0.6
1,887,802	-		Atu4723	0.81	+0.2
1,887,819	+		Atu4723	0.82	-0.3
1,887,872	-		Atu4723	0.85	+1.4
1,887,894	+		Atu4723	0.86	+1.4
1,887,947	+		Atu4723	0.89	-0.4
1,887,990	-				-0.5
1,888,107	+				-1.3
1,888,132	+				+0.0
1,888,218	+				+0.3
1,888,226	-				+0.3
1,888,302	-		Atu4724	0.44	-0.3
1,888,361	+		Atu4724	0.73	+0.0
1,888,366	+		Atu4724	0.75	+0.0
1,888,469	+				+0.6
1,888,642	+		Atu8200	0.14	-1.0
1,888,668	-		Atu8200	0.22	-0.2
1,888,696	-		Atu8200	0.31	-0.5
1,888,734	+		Atu8200	0.42	+0.8
1,888,903	+				-0.2
1,888,911	-				-0.1
1,888,927	+				+0.7
1,888,974	+				+1.1
1,889,057	+				+0.1