Strain Fitness in Agrobacterium fabrum C58 around Atu4247

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
1,370,293	+				-0.2
1,370,301	-				-0.1
1,370,301	-				+0.3
1,370,339	+		Atu4246	0.13	-0.2
1,370,347	-		Atu4246	0.14	+0.1
1,370,425	+		Atu4246	0.21	+0.5
1,370,638	-		Atu4246	0.41	-0.0
1,370,638	-		Atu4246	0.41	-0.1
1,370,638	-		Atu4246	0.41	+0.4
1,370,688	-		Atu4246	0.45	+0.2
1,370,695	+		Atu4246	0.46	+0.3
1,370,840	+		Atu4246	0.59	+0.3
1,370,864	-		Atu4246	0.61	+0.9
1,371,073	+		Atu4246	0.81	+1.0
1,371,128	-		Atu4246	0.86	+2.5
1,371,612	-		Atu4247	0.22	+0.7
1,371,612	-		Atu4247	0.22	+0.7
1,371,619	-		Atu4247	0.22	+0.3
1,371,675	+		Atu4247	0.26	-1.9
1,371,831	+		Atu4247	0.37	+0.6
1,372,105	-		Atu4247	0.56	-0.7
1,372,117	-		Atu4247	0.57	-1.1
1,372,189	-		Atu4247	0.62	+0.5
1,372,245	-		Atu4247	0.65	-0.5
1,372,262	-		Atu4247	0.67	+0.8
1,372,270	+		Atu4247	0.67	+0.2
1,372,270	+		Atu4247	0.67	+0.4
1,372,292	+		Atu4247	0.69	+0.5
1,372,309	+		Atu4247	0.70	-0.2
1,372,336	+		Atu4247	0.72	+0.8
1,372,336	+		Atu4247	0.72	-0.5
1,372,344	-		Atu4247	0.72	+0.5
1,372,371	+		Atu4247	0.74	+0.5
1,372,379	-		Atu4247	0.75	+1.0
1,372,414	-		Atu4247	0.77	-0.0
1,372,495	-		Atu4247	0.83	-0.0
1,372,510	+		Atu4247	0.84	-0.2
1,372,510	+		Atu4247	0.84	+1.5
1,372,667	+				+0.5
1,372,691	-				-0.8
1,372,694	-				-0.1
1,372,766	-				-0.2
1,373,040	-				-0.1
1,373,205	+				-0.2
1,373,205	+				+0.5
1,373,216	+				-0.4
1,373,267	-				-0.1
1,373,340	+				+1.1
1,373,356	+				-0.3
1,373,477	+		Atu4249	0.18	-0.1
1,373,485	-		Atu4249	0.19	+0.5
1,373,530	+		Atu4249	0.23	-0.1
1,373,553	+		Atu4249	0.26	+0.9
1,373,647	+		Atu4249	0.35	-1.4
1,373,686	-		Atu4249	0.38	-0.4
1,373,733	+		Atu4249	0.43	-0.2
1,373,740	+		Atu4249	0.43	+1.6