Strain Fitness in Agrobacterium fabrum C58 around Atu2467

Experiment: Bethi_Library_OD0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bethi_Library_OD0.01
2,435,330	+		Atu2465	0.82	+0.8
2,435,391	-		Atu2465	0.86	-1.1
2,435,490	+				+0.0
2,435,528	+				-0.2
2,435,548	-				-1.5
2,435,575	+				+0.5
2,435,575	+				-0.7
2,435,638	-				+0.2
2,435,780	+		Atu2466	0.30	+0.3
2,435,790	+		Atu2466	0.31	+0.1
2,435,790	+		Atu2466	0.31	-0.5
2,435,798	-		Atu2466	0.32	+0.3
2,435,840	-		Atu2466	0.38	-0.1
2,435,865	-		Atu2466	0.42	-0.1
2,435,865	-		Atu2466	0.42	-0.1
2,435,865	-		Atu2466	0.42	+1.1
2,435,865	-		Atu2466	0.42	-0.1
2,435,898	-		Atu2466	0.47	+0.2
2,435,900	+		Atu2466	0.47	-0.8
2,435,935	+		Atu2466	0.52	+0.1
2,435,990	+		Atu2466	0.60	+0.7
2,435,998	-		Atu2466	0.62	-0.8
2,436,023	+		Atu2466	0.65	+0.3
2,436,031	-		Atu2466	0.67	-0.4
2,436,036	-		Atu2466	0.67	+0.3
2,436,041	+		Atu2466	0.68	-0.3
2,436,073	-		Atu2466	0.73	-0.2
2,436,083	-		Atu2466	0.74	-0.5
2,436,107	-		Atu2466	0.78	-0.3
2,436,209	-				+3.3
2,436,449	+		Atu2467	0.11	+0.3
2,436,450	+		Atu2467	0.11	-0.4
2,436,450	+		Atu2467	0.11	-0.2
2,436,457	-		Atu2467	0.12	+0.5
2,436,457	-		Atu2467	0.12	+2.2
2,436,647	-		Atu2467	0.30	+0.0
2,436,675	-		Atu2467	0.32	+1.3
2,436,736	+		Atu2467	0.38	+0.5
2,436,737	-		Atu2467	0.38	-0.2
2,436,843	+		Atu2467	0.48	-0.3
2,436,939	+		Atu2467	0.57	+1.2
2,436,971	+		Atu2467	0.60	+0.0
2,436,979	-		Atu2467	0.60	+0.2
2,436,979	-		Atu2467	0.60	-0.0
2,437,097	+		Atu2467	0.71	+1.5
2,437,103	+		Atu2467	0.72	+0.2
2,437,103	+		Atu2467	0.72	+0.8
2,437,234	-		Atu2467	0.84	+0.3
2,437,260	+		Atu2467	0.86	+0.9
2,437,350	-				+0.2
2,437,350	-				-0.3
2,437,350	-				-0.0
2,437,360	-				-1.0
2,437,429	+				-0.3
2,437,540	-				+1.3
2,437,639	+				-0.2
2,437,650	-				-0.4
2,437,716	-				-0.3
2,437,732	+				-0.2
2,437,740	-				-0.3
2,437,740	-				+0.1
2,437,740	-				-0.4
2,437,740	-				+0.0
2,437,744	+				-0.8
2,437,781	+				-0.2
2,437,859	+				+0.2
2,437,879	-				+0.6
2,437,892	+				+0.7
2,437,895	-				+0.4
2,437,913	+		Atu2469	0.11	+1.7
2,437,921	-		Atu2469	0.12	+0.2
2,437,937	-		Atu2469	0.14	+0.1
2,437,985	-		Atu2469	0.19	-0.4
2,438,011	+		Atu2469	0.21	-1.3
2,438,019	-		Atu2469	0.22	-1.0
2,438,117	+		Atu2469	0.33	-0.0
2,438,122	+		Atu2469	0.33	+0.0
2,438,308	+		Atu2469	0.53	+0.0